Corydalis tomentella (corydalis_tomentella)
Imported from atlas release summary for Corydalis tomentella.
1483
Candidate Protein Records
1121
Pathway-Level Records
3117
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3117
Family-Level Calls
C4H
6.77%
C3'H/CYP98A
6.51%
BAHD
5.71%
IFS
4.14%
POD
4.01%
T3O
3.56%
UGT
3.56%
CYP76
3.5%
Other Families
62.24%
More Families (96)
7DLGT
99
3.18%
UFGT
99
3.18%
DWF4/CYP90B1
89
2.86%
4CL
87
2.79%
F3H
84
2.69%
BR6OX2/CYP85A2
71
2.28%
F3'H/CYP75B
70
2.25%
CYP71
63
2.02%
NMT
59
1.89%
H6H
52
1.67%
T16H
46
1.48%
STR
45
1.44%
CODM/T6ODM
41
1.32%
IFR
40
1.28%
CAD
39
1.25%
HCT
36
1.15%
SMT1/SMT2/SMT3
36
1.15%
BBE
33
1.06%
CYP90D1
32
1.03%
ROT3/CYP90C1
31
0.99%
CAS
31
0.99%
CSE
29
0.93%
7DLH
28
0.9%
CNMT
25
0.8%
TRI/TRII
25
0.8%
IO
24
0.77%
F3'5'H/CYP75A
24
0.77%
LAC
24
0.77%
PYKS
23
0.74%
COMT
23
0.74%
RAS
22
0.71%
NCS
21
0.67%
G8O/G8H
20
0.64%
GS
20
0.64%
TAT
20
0.64%
TPS
20
0.64%
GES
19
0.61%
16OMT
19
0.61%
FNS
18
0.58%
ANR
18
0.58%
CCR
18
0.58%
F5H/CYP84A
18
0.58%
COR
16
0.51%
SGD
16
0.51%
ANS/LDOX
15
0.48%
PMT
13
0.42%
SLS
13
0.42%
CPD/CYP90A1
13
0.42%
8HGO
12
0.38%
PAL
12
0.38%
LAMT
10
0.32%
MVK
10
0.32%
MPO
9
0.29%
DFR
9
0.29%
CPR
8
0.26%
CYP51G1
8
0.26%
AACT
8
0.26%
CYP719
7
0.22%
BR6OX1/CYP85A1
7
0.22%
GGPPS
7
0.22%
CCoAOMT
6
0.19%
FPPS
6
0.19%
CYP80B1
5
0.16%
CHI
5
0.16%
HPPR
5
0.16%
SMO1/SMO2
5
0.16%
SQS/FDFT1
5
0.16%
DXS
5
0.16%
TYDC_DDC
4
0.13%
FLS
4
0.13%
DET2
4
0.13%
FK
4
0.13%
HMGR
4
0.13%
ISY
3
0.1%
TDC
3
0.1%
CHS
3
0.1%
MCT/IspD
3
0.1%
MVD
3
0.1%
6OMT_4OMT_SOMT
2
0.06%
XMT_MXMT_DXMT
2
0.06%
ODC
2
0.06%
SQE
2
0.06%
DWF7
2
0.06%
HYD1
2
0.06%
DWF1
2
0.06%
PMK
2
0.06%
DXR
2
0.06%
IDI
2
0.06%
HMGS
2
0.06%
ADC
1
0.03%
CPI1
1
0.03%
DWF5
1
0.03%
MDS/IspF
1
0.03%
CMK/IspE
1
0.03%
HDR/IspH
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 323 | 19 | BAHD (124) | View species results |
| Phenylpropanoid pathway | 247 | 12 | POD (110) | View species results |
| Alkaloid pathway | 241 | 21 | 7DLGT (47) | View species results |
| Flavonoid pathway | 141 | 10 | UFGT (92) | View species results |
| Rosmarinic acid pathway | 103 | 7 | C4H (42) | View species results |
| Steroid pathway | 66 | 11 | CAS (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1332 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 236 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| GWHPAORS022300 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| GWHPAORS022301 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| GWHPAORS022302 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| GWHPAORS022305 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| GWHPAORS022306 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| GWHPAORS022308 | Alkaloid | NCS | medium | pass | NCS__00002__sp_A2A1A1_NCS2_COPJA |
| GWHPAORS022326 | Alkaloid | NCS | low | borderline | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| GWHPAORS022714 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| GWHPAORS022715 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| GWHPAORS022965 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| GWHPAORS025995 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| GWHPAORS025996 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| GWHPAORS025999 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| GWHPAORS026158 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| GWHPAORS028054 | Alkaloid | NCS | low | borderline | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| GWHPAORS034154 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| GWHPAORS003407 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| GWHPAORS003440 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| GWHPAORS004812 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| GWHPAORS005918 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| GWHPAORS005924 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| GWHPAORS006544 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| GWHPAORS006940 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| GWHPAORS007369 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| GWHPAORS007617 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| GWHPAORS008447 | Alkaloid | NMT | low | borderline | NMT__00065__sp_Q9SEH7_PMT2_TOBAC |
| GWHPAORS008536 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GWHPAORS008763 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| GWHPAORS009416 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| GWHPAORS009420 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| GWHPAORS010929 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| GWHPAORS012243 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| GWHPAORS012244 | Alkaloid | NMT | low | borderline | NMT__00039__sp_Q84W92_ANM13_ARATH |
| GWHPAORS012309 | Alkaloid | NMT | low | borderline | NMT__00012__sp_C3SBS8_TNMT_ESCCA |
| GWHPAORS013438 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| GWHPAORS013882 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| GWHPAORS013933 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| GWHPAORS014662 | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| GWHPAORS014993 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| GWHPAORS015422 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| GWHPAORS015493 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| GWHPAORS016006 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| GWHPAORS016170 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| GWHPAORS016483 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| GWHPAORS016643 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| GWHPAORS017039 | Alkaloid | NMT | low | borderline | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| GWHPAORS017513 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| GWHPAORS018844 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| GWHPAORS018906 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| GWHPAORS020214 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |