PlantSME Plant secondary metabolism enzyme database

Corylus mandshurica (corylus_mandshurica)

Imported from atlas release summary for Corylus mandshurica.

1590
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.38% Alkaloid pathway 24.84% Phenylpropanoid pathway 20.44% Flavonoid pathway 11.13% Steroid pathway 7.99% Rosmarinic acid pathway 5.22%
Family Distribution
C4H 7.46% BAHD 5.48% UGT 5.3% C3'H/CYP98A 4.73% 7DLGT 3.78% CYP76 3.47% 4CL 3.32% POD 2.98%
Other Families 63.48%
More Families (97)
UFGT 115 2.96% F3H 114 2.93% IFS 106 2.73% T3O 88 2.26% CAD 85 2.19% NMT 84 2.16% CODM/T6ODM 83 2.13% G8O/G8H 83 2.13% TRI/TRII 82 2.11% STR 77 1.98% LAC 77 1.98% CAS 73 1.88% F3'H/CYP75B 69 1.77% FNS 69 1.77% SMT1/SMT2/SMT3 68 1.75% DWF4/CYP90B1 67 1.72% T16H 47 1.21% H6H 46 1.18% TPS 46 1.18% IFR 44 1.13% GES 42 1.08% COMT 41 1.05% GS 37 0.95% CYP71 36 0.93% SGD 34 0.87% PAL 30 0.77% HCT 30 0.77% PYKS 29 0.75% BBE 28 0.72% F3'5'H/CYP75A 27 0.69% ANR 26 0.67% NCS 25 0.64% CCR 25 0.64% BR6OX2/CYP85A2 25 0.64% PMT 24 0.62% F5H/CYP84A 24 0.62% CSE 24 0.62% RAS 24 0.62% CYP90D1 24 0.62% BR6OX1/CYP85A1 24 0.62% SLS 20 0.51% ANS/LDOX 19 0.49% DFR 19 0.49% 16OMT 18 0.46% COR 17 0.44% 7DLH 17 0.44% CYP80B1 15 0.39% TAT 15 0.39% IO 14 0.36% LAMT 14 0.36% 8HGO 13 0.33% CNMT 12 0.31% CPD/CYP90A1 12 0.31% CCoAOMT 10 0.26% FPPS 10 0.26% ROT3/CYP90C1 9 0.23% AACT 9 0.23% CHS 8 0.21% ADC 7 0.18% MPO 7 0.18% CPR 7 0.18% SQS/FDFT1 7 0.18% GGPPS 7 0.18% TYDC_DDC 6 0.15% HPPR 6 0.15% CHI 4 0.1% MVD 4 0.1% MVK 4 0.1% DXS 4 0.1% CMK/IspE 4 0.1% HMGS 4 0.1% CYP719 3 0.08% TDC 3 0.08% DET2 3 0.08% SQE 3 0.08% SMO1/SMO2 3 0.08% HMGR 3 0.08% XMT_MXMT_DXMT 2 0.05% 6OMT_4OMT_SOMT 2 0.05% CYP51G1 2 0.05% DWF7 2 0.05% HYD1 2 0.05% PMK 2 0.05% CYP80F1 1 0.03% ODC 1 0.03% ISY 1 0.03% FLS 1 0.03% FK 1 0.03% DWF1 1 0.03% CPI1 1 0.03% DWF5 1 0.03% HDR/IspH 1 0.03% MCT/IspD 1 0.03% IDI 1 0.03% DXR 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 UGT (180) View species results
Alkaloid pathway 395 23 TRI/TRII (67) View species results
Phenylpropanoid pathway 325 11 POD (110) View species results
Flavonoid pathway 177 11 UFGT (96) View species results
Steroid pathway 127 11 CAS (63) View species results
Rosmarinic acid pathway 83 7 4CL (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
CmaG0000903.1 Flavonoid CHS medium pass CHS__00009__sp_Q9AU11_PKS1_RUBID
CmaG0001427.1 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
CmaG0010757.1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
CmaG0010759.1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
CmaG0015695.1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
CmaG0015696.1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
CmaG0018935.1 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
CmaG0018936.1 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA