Corylus mandshurica (corylus_mandshurica)
Imported from atlas release summary for Corylus mandshurica.
1590
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1590
Candidate Genes
C4H
7.46%
BAHD
5.48%
UGT
5.3%
C3'H/CYP98A
4.73%
7DLGT
3.78%
CYP76
3.47%
4CL
3.32%
POD
2.98%
Other Families
63.48%
More Families (97)
UFGT
115
2.96%
F3H
114
2.93%
IFS
106
2.73%
T3O
88
2.26%
CAD
85
2.19%
NMT
84
2.16%
CODM/T6ODM
83
2.13%
G8O/G8H
83
2.13%
TRI/TRII
82
2.11%
STR
77
1.98%
LAC
77
1.98%
CAS
73
1.88%
F3'H/CYP75B
69
1.77%
FNS
69
1.77%
SMT1/SMT2/SMT3
68
1.75%
DWF4/CYP90B1
67
1.72%
T16H
47
1.21%
H6H
46
1.18%
TPS
46
1.18%
IFR
44
1.13%
GES
42
1.08%
COMT
41
1.05%
GS
37
0.95%
CYP71
36
0.93%
SGD
34
0.87%
PAL
30
0.77%
HCT
30
0.77%
PYKS
29
0.75%
BBE
28
0.72%
F3'5'H/CYP75A
27
0.69%
ANR
26
0.67%
NCS
25
0.64%
CCR
25
0.64%
BR6OX2/CYP85A2
25
0.64%
PMT
24
0.62%
F5H/CYP84A
24
0.62%
CSE
24
0.62%
RAS
24
0.62%
CYP90D1
24
0.62%
BR6OX1/CYP85A1
24
0.62%
SLS
20
0.51%
ANS/LDOX
19
0.49%
DFR
19
0.49%
16OMT
18
0.46%
COR
17
0.44%
7DLH
17
0.44%
CYP80B1
15
0.39%
TAT
15
0.39%
IO
14
0.36%
LAMT
14
0.36%
8HGO
13
0.33%
CNMT
12
0.31%
CPD/CYP90A1
12
0.31%
CCoAOMT
10
0.26%
FPPS
10
0.26%
ROT3/CYP90C1
9
0.23%
AACT
9
0.23%
CHS
8
0.21%
ADC
7
0.18%
MPO
7
0.18%
CPR
7
0.18%
SQS/FDFT1
7
0.18%
GGPPS
7
0.18%
TYDC_DDC
6
0.15%
HPPR
6
0.15%
CHI
4
0.1%
MVD
4
0.1%
MVK
4
0.1%
DXS
4
0.1%
CMK/IspE
4
0.1%
HMGS
4
0.1%
CYP719
3
0.08%
TDC
3
0.08%
DET2
3
0.08%
SQE
3
0.08%
SMO1/SMO2
3
0.08%
HMGR
3
0.08%
XMT_MXMT_DXMT
2
0.05%
6OMT_4OMT_SOMT
2
0.05%
CYP51G1
2
0.05%
DWF7
2
0.05%
HYD1
2
0.05%
PMK
2
0.05%
CYP80F1
1
0.03%
ODC
1
0.03%
ISY
1
0.03%
FLS
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
CPI1
1
0.03%
DWF5
1
0.03%
HDR/IspH
1
0.03%
MCT/IspD
1
0.03%
IDI
1
0.03%
DXR
1
0.03%
MDS/IspF
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 483 | 20 | UGT (180) | View species results |
| Alkaloid pathway | 395 | 23 | TRI/TRII (67) | View species results |
| Phenylpropanoid pathway | 325 | 11 | POD (110) | View species results |
| Flavonoid pathway | 177 | 11 | UFGT (96) | View species results |
| Steroid pathway | 127 | 11 | CAS (63) | View species results |
| Rosmarinic acid pathway | 83 | 7 | 4CL (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1322 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 267 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CmaG0001839.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0002708.1 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| CmaG0002709.1 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| CmaG0002710.1 | Alkaloid | GES | medium | pass | GES__00005__sp_Q308N0_GRNL6_PERFR |
| CmaG0002711.1 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| CmaG0002712.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0005310.1 | Alkaloid | GES | medium | pass | GES__00010__sp_Q93YV0_GES_ARATH |
| CmaG0005311.1 | Alkaloid | GES | medium | pass | GES__00010__sp_Q93YV0_GES_ARATH |
| CmaG0005315.1 | Alkaloid | GES | medium | pass | GES__00010__sp_Q93YV0_GES_ARATH |
| CmaG0005316.1 | Alkaloid | GES | medium | pass | GES__00010__sp_Q93YV0_GES_ARATH |
| CmaG0005348.1 | Alkaloid | GES | medium | pass | GES__00010__sp_Q93YV0_GES_ARATH |
| CmaG0005475.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| CmaG0005476.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| CmaG0005477.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| CmaG0005478.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| CmaG0005479.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| CmaG0005480.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| CmaG0005484.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0005485.1 | Alkaloid | GES | low | borderline | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0005486.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0008382.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0013340.1 | Alkaloid | GES | low | borderline | GES__00011__sp_R9QMR5_ATERP_PINBN |
| CmaG0013342.1 | Alkaloid | GES | low | borderline | GES__00011__sp_R9QMR5_ATERP_PINBN |
| CmaG0016103.1 | Alkaloid | GES | low | borderline | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0020715.1 | Alkaloid | GES | medium | pass | GES__00008__sp_Q84ZW8_ACSS_MAIZE |
| CmaG0021655.1 | Alkaloid | GES | medium | pass | GES__00006__sp_Q4JHG3_GRNLC_PERFH |
| CmaG0022154.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0022704.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0022705.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0022719.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0022723.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0022724.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0025455.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| CmaG0026865.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0026867.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0026868.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0026870.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0026874.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0026876.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0026877.1 | Alkaloid | GES | medium | pass | GES__00002__sp_C0KWV4_GRNLG_PERFH |
| CmaG0026878.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |
| CmaG0026879.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |