Corylus mandshurica (corylus_mandshurica)
Imported from atlas release summary for Corylus mandshurica.
1590
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1590
Candidate Genes
C4H
7.46%
BAHD
5.48%
UGT
5.3%
C3'H/CYP98A
4.73%
7DLGT
3.78%
CYP76
3.47%
4CL
3.32%
POD
2.98%
Other Families
63.48%
More Families (97)
UFGT
115
2.96%
F3H
114
2.93%
IFS
106
2.73%
T3O
88
2.26%
CAD
85
2.19%
NMT
84
2.16%
CODM/T6ODM
83
2.13%
G8O/G8H
83
2.13%
TRI/TRII
82
2.11%
STR
77
1.98%
LAC
77
1.98%
CAS
73
1.88%
F3'H/CYP75B
69
1.77%
FNS
69
1.77%
SMT1/SMT2/SMT3
68
1.75%
DWF4/CYP90B1
67
1.72%
T16H
47
1.21%
H6H
46
1.18%
TPS
46
1.18%
IFR
44
1.13%
GES
42
1.08%
COMT
41
1.05%
GS
37
0.95%
CYP71
36
0.93%
SGD
34
0.87%
PAL
30
0.77%
HCT
30
0.77%
PYKS
29
0.75%
BBE
28
0.72%
F3'5'H/CYP75A
27
0.69%
ANR
26
0.67%
NCS
25
0.64%
CCR
25
0.64%
BR6OX2/CYP85A2
25
0.64%
PMT
24
0.62%
F5H/CYP84A
24
0.62%
CSE
24
0.62%
RAS
24
0.62%
CYP90D1
24
0.62%
BR6OX1/CYP85A1
24
0.62%
SLS
20
0.51%
ANS/LDOX
19
0.49%
DFR
19
0.49%
16OMT
18
0.46%
COR
17
0.44%
7DLH
17
0.44%
CYP80B1
15
0.39%
TAT
15
0.39%
IO
14
0.36%
LAMT
14
0.36%
8HGO
13
0.33%
CNMT
12
0.31%
CPD/CYP90A1
12
0.31%
CCoAOMT
10
0.26%
FPPS
10
0.26%
ROT3/CYP90C1
9
0.23%
AACT
9
0.23%
CHS
8
0.21%
ADC
7
0.18%
MPO
7
0.18%
CPR
7
0.18%
SQS/FDFT1
7
0.18%
GGPPS
7
0.18%
TYDC_DDC
6
0.15%
HPPR
6
0.15%
CHI
4
0.1%
MVD
4
0.1%
MVK
4
0.1%
DXS
4
0.1%
CMK/IspE
4
0.1%
HMGS
4
0.1%
CYP719
3
0.08%
TDC
3
0.08%
DET2
3
0.08%
SQE
3
0.08%
SMO1/SMO2
3
0.08%
HMGR
3
0.08%
XMT_MXMT_DXMT
2
0.05%
6OMT_4OMT_SOMT
2
0.05%
CYP51G1
2
0.05%
DWF7
2
0.05%
HYD1
2
0.05%
PMK
2
0.05%
CYP80F1
1
0.03%
ODC
1
0.03%
ISY
1
0.03%
FLS
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
CPI1
1
0.03%
DWF5
1
0.03%
HDR/IspH
1
0.03%
MCT/IspD
1
0.03%
IDI
1
0.03%
DXR
1
0.03%
MDS/IspF
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 483 | 20 | UGT (180) | View species results |
| Alkaloid pathway | 395 | 23 | TRI/TRII (67) | View species results |
| Phenylpropanoid pathway | 325 | 11 | POD (110) | View species results |
| Flavonoid pathway | 177 | 11 | UFGT (96) | View species results |
| Steroid pathway | 127 | 11 | CAS (63) | View species results |
| Rosmarinic acid pathway | 83 | 7 | 4CL (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1322 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 267 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CmaG0000347.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0002334.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0002451.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0002452.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0002453.1 | Alkaloid | NCS | medium | pass | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| CmaG0002454.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0002570.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0002573.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0003214.1 | Alkaloid | NCS | medium | pass | NCS__00005__sp_Q67A25_NCS_THLFG |
| CmaG0003240.1 | Alkaloid | NCS | low | borderline | NCS__00005__sp_Q67A25_NCS_THLFG |
| CmaG0003241.1 | Alkaloid | NCS | low | borderline | NCS__00005__sp_Q67A25_NCS_THLFG |
| CmaG0003245.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0003247.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0003248.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0003275.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0003278.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0003279.1 | Alkaloid | NCS | low | borderline | NCS__00005__sp_Q67A25_NCS_THLFG |
| CmaG0003280.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| CmaG0007662.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0010938.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0020261.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0021197.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0023504.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0024547.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| CmaG0028372.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |