PlantSME Plant secondary metabolism enzyme database

Corylus mandshurica (corylus_mandshurica)

Imported from atlas release summary for Corylus mandshurica.

1590
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.38% Alkaloid pathway 24.84% Phenylpropanoid pathway 20.44% Flavonoid pathway 11.13% Steroid pathway 7.99% Rosmarinic acid pathway 5.22%
Family Distribution
C4H 7.46% BAHD 5.48% UGT 5.3% C3'H/CYP98A 4.73% 7DLGT 3.78% CYP76 3.47% 4CL 3.32% POD 2.98%
Other Families 63.48%
More Families (97)
UFGT 115 2.96% F3H 114 2.93% IFS 106 2.73% T3O 88 2.26% CAD 85 2.19% NMT 84 2.16% CODM/T6ODM 83 2.13% G8O/G8H 83 2.13% TRI/TRII 82 2.11% STR 77 1.98% LAC 77 1.98% CAS 73 1.88% F3'H/CYP75B 69 1.77% FNS 69 1.77% SMT1/SMT2/SMT3 68 1.75% DWF4/CYP90B1 67 1.72% T16H 47 1.21% H6H 46 1.18% TPS 46 1.18% IFR 44 1.13% GES 42 1.08% COMT 41 1.05% GS 37 0.95% CYP71 36 0.93% SGD 34 0.87% PAL 30 0.77% HCT 30 0.77% PYKS 29 0.75% BBE 28 0.72% F3'5'H/CYP75A 27 0.69% ANR 26 0.67% NCS 25 0.64% CCR 25 0.64% BR6OX2/CYP85A2 25 0.64% PMT 24 0.62% F5H/CYP84A 24 0.62% CSE 24 0.62% RAS 24 0.62% CYP90D1 24 0.62% BR6OX1/CYP85A1 24 0.62% SLS 20 0.51% ANS/LDOX 19 0.49% DFR 19 0.49% 16OMT 18 0.46% COR 17 0.44% 7DLH 17 0.44% CYP80B1 15 0.39% TAT 15 0.39% IO 14 0.36% LAMT 14 0.36% 8HGO 13 0.33% CNMT 12 0.31% CPD/CYP90A1 12 0.31% CCoAOMT 10 0.26% FPPS 10 0.26% ROT3/CYP90C1 9 0.23% AACT 9 0.23% CHS 8 0.21% ADC 7 0.18% MPO 7 0.18% CPR 7 0.18% SQS/FDFT1 7 0.18% GGPPS 7 0.18% TYDC_DDC 6 0.15% HPPR 6 0.15% CHI 4 0.1% MVD 4 0.1% MVK 4 0.1% DXS 4 0.1% CMK/IspE 4 0.1% HMGS 4 0.1% CYP719 3 0.08% TDC 3 0.08% DET2 3 0.08% SQE 3 0.08% SMO1/SMO2 3 0.08% HMGR 3 0.08% XMT_MXMT_DXMT 2 0.05% 6OMT_4OMT_SOMT 2 0.05% CYP51G1 2 0.05% DWF7 2 0.05% HYD1 2 0.05% PMK 2 0.05% CYP80F1 1 0.03% ODC 1 0.03% ISY 1 0.03% FLS 1 0.03% FK 1 0.03% DWF1 1 0.03% CPI1 1 0.03% DWF5 1 0.03% HDR/IspH 1 0.03% MCT/IspD 1 0.03% IDI 1 0.03% DXR 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 UGT (180) View species results
Alkaloid pathway 395 23 TRI/TRII (67) View species results
Phenylpropanoid pathway 325 11 POD (110) View species results
Flavonoid pathway 177 11 UFGT (96) View species results
Steroid pathway 127 11 CAS (63) View species results
Rosmarinic acid pathway 83 7 4CL (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
CmaG0023680.1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
CmaG0023750.1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CmaG0023751.1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CmaG0023842.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CmaG0024338.1 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
CmaG0024414.1 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
CmaG0024887.1 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
CmaG0025011.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CmaG0025012.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CmaG0025029.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CmaG0025614.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
CmaG0026055.1 Phenylpropanoid POD medium pass POD__00011__sp_Q05431_APX1_ARATH
CmaG0026632.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CmaG0026633.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CmaG0028167.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CmaG0028169.1 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL