Cucumis sativus (cucumis_sativus)
Imported from atlas release summary for Cucumis sativus.
1353
Candidate Protein Records
1183
Pathway-Level Records
2750
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2750
Family-Level Calls
C4H
6.84%
BAHD
5.56%
C3'H/CYP98A
4.91%
UGT
4.44%
CYP76
4.25%
IFS
4.04%
4CL
4.04%
POD
3.85%
Other Families
62.07%
More Families (94)
7DLGT
102
3.71%
UFGT
101
3.67%
T3O
82
2.98%
F3H
74
2.69%
DWF4/CYP90B1
69
2.51%
NMT
62
2.25%
STR
48
1.75%
PAL
48
1.75%
CODM/T6ODM
43
1.56%
F3'H/CYP75B
39
1.42%
CAD
38
1.38%
H6H
36
1.31%
TPS
36
1.31%
CAS
35
1.27%
BR6OX2/CYP85A2
35
1.27%
TRI/TRII
32
1.16%
SMT1/SMT2/SMT3
32
1.16%
GES
31
1.13%
SGD
29
1.05%
HCT
29
1.05%
IFR
28
1.02%
CSE
27
0.98%
RAS
25
0.91%
G8O/G8H
23
0.84%
T16H
23
0.84%
F3'5'H/CYP75A
23
0.84%
LAC
22
0.8%
PMT
20
0.73%
BBE
20
0.73%
SLS
20
0.73%
GS
20
0.73%
CCR
20
0.73%
CYP90D1
20
0.73%
ANR
19
0.69%
COMT
19
0.69%
FNS
18
0.65%
TAT
18
0.65%
IO
17
0.62%
CYP71
17
0.62%
PYKS
16
0.58%
NCS
16
0.58%
16OMT
16
0.58%
CPD/CYP90A1
16
0.58%
F5H/CYP84A
15
0.55%
COR
14
0.51%
8HGO
13
0.47%
7DLH
12
0.44%
CYP719
11
0.4%
BR6OX1/CYP85A1
11
0.4%
CNMT
10
0.36%
CYP80B1
10
0.36%
LAMT
10
0.36%
ANS/LDOX
9
0.33%
DFR
9
0.33%
AACT
9
0.33%
MPO
8
0.29%
ROT3/CYP90C1
8
0.29%
HPPR
6
0.22%
FPPS
6
0.22%
CPR
5
0.18%
SQS/FDFT1
5
0.18%
GGPPS
5
0.18%
CHS
4
0.15%
CHI
4
0.15%
CYP51G1
4
0.15%
DXS
4
0.15%
MVD
4
0.15%
CCoAOMT
3
0.11%
SQE
3
0.11%
DET2
3
0.11%
MVK
3
0.11%
HMGR
3
0.11%
ISY
2
0.07%
TYDC_DDC
2
0.07%
ODC
2
0.07%
CPI1
2
0.07%
SMO1/SMO2
2
0.07%
DWF7
2
0.07%
DWF1
2
0.07%
IDI
2
0.07%
HDR/IspH
2
0.07%
MCT/IspD
2
0.07%
ADC
1
0.04%
TDC
1
0.04%
FLS
1
0.04%
FK
1
0.04%
HYD1
1
0.04%
DWF5
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
CMK/IspE
1
0.04%
HMGS
1
0.04%
PMK
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 364 | 19 | BAHD (122) | View species results |
| Alkaloid pathway | 243 | 21 | 7DLGT (45) | View species results |
| Phenylpropanoid pathway | 241 | 12 | POD (104) | View species results |
| Flavonoid pathway | 163 | 11 | UFGT (92) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (32) | View species results |
| Steroid pathway | 66 | 11 | CAS (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1006 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 207 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CUsat06G0015780.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| CUsat06G0020880.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| CUsat06G0021800.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| CUsat06G0027170.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| CUsat06G0028600.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| CUsat06G0032550.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| CUsat06G0032580.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| CUsat06G0033260.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| CUsat06G0036000.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| CUsat06G0038880.1 | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| CUsat07G0004100.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| CUsat07G0010460.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |