Dendrobium nobile (dendrobium_nobile)
Imported from atlas release summary for Dendrobium nobile.
1248
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1248
Candidate Genes
C4H
6.85%
C3'H/CYP98A
6.04%
BAHD
5.07%
UGT
4.26%
7DLGT
3.97%
UFGT
3.84%
T3O
3.81%
4CL
3.68%
Other Families
62.46%
More Families (94)
IFS
107
3.46%
POD
98
3.17%
CYP76
97
3.13%
F3H
86
2.78%
DWF4/CYP90B1
83
2.68%
F3'H/CYP75B
76
2.46%
CYP71
70
2.26%
STR
69
2.23%
NMT
68
2.2%
CAD
62
2.0%
SMT1/SMT2/SMT3
52
1.68%
BR6OX2/CYP85A2
51
1.65%
TPS
50
1.62%
CAS
49
1.58%
GES
47
1.52%
CODM/T6ODM
41
1.32%
H6H
38
1.23%
IFR
38
1.23%
CYP90D1
36
1.16%
G8O/G8H
34
1.1%
GS
31
1.0%
SLS
31
1.0%
TRI/TRII
30
0.97%
PYKS
29
0.94%
LAC
27
0.87%
CSE
26
0.84%
NCS
23
0.74%
SGD
23
0.74%
T16H
23
0.74%
FNS
23
0.74%
RAS
22
0.71%
CCR
20
0.65%
ANR
17
0.55%
F5H/CYP84A
17
0.55%
CYP51G1
17
0.55%
HCT
16
0.52%
COMT
13
0.42%
ROT3/CYP90C1
13
0.42%
PMT
12
0.39%
IO
12
0.39%
8HGO
11
0.36%
CHS
11
0.36%
LAMT
10
0.32%
F3'5'H/CYP75A
10
0.32%
CCoAOMT
10
0.32%
MVD
9
0.29%
BBE
8
0.26%
7DLH
8
0.26%
16OMT
8
0.26%
COR
8
0.26%
DFR
8
0.26%
ANS/LDOX
8
0.26%
TAT
8
0.26%
BR6OX1/CYP85A1
8
0.26%
CNMT
7
0.23%
MPO
7
0.23%
CPR
7
0.23%
SQS/FDFT1
7
0.23%
DET2
7
0.23%
GGPPS
7
0.23%
TYDC_DDC
6
0.19%
PAL
6
0.19%
FPPS
6
0.19%
CPD/CYP90A1
5
0.16%
CYP719
4
0.13%
ISY
4
0.13%
DWF1
4
0.13%
HMGR
4
0.13%
DXS
4
0.13%
AACT
4
0.13%
ADC
3
0.1%
CHI
3
0.1%
HPPR
3
0.1%
HYD1
3
0.1%
IDI
3
0.1%
MVK
3
0.1%
SQE
2
0.06%
SMO1/SMO2
2
0.06%
DWF5
2
0.06%
MCT/IspD
2
0.06%
PMK
2
0.06%
HMGS
2
0.06%
TDC
1
0.03%
XMT_MXMT_DXMT
1
0.03%
CYP80B1
1
0.03%
ODC
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
DWF7
1
0.03%
CMK/IspE
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
HDR/IspH
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 361 | 19 | UGT (128) | View species results |
| Alkaloid pathway | 289 | 19 | 7DLGT (52) | View species results |
| Phenylpropanoid pathway | 227 | 11 | POD (91) | View species results |
| Flavonoid pathway | 176 | 9 | UFGT (116) | View species results |
| Rosmarinic acid pathway | 113 | 7 | C4H (57) | View species results |
| Steroid pathway | 82 | 15 | SMT1/SMT2/SMT3 (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1220 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 195 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| KAI0507773.1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| KAI0510062.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| KAI0510261.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| KAI0510429.1 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| KAI0510544.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| KAI0510853.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| KAI0510854.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| KAI0511190.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| KAI0511652.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0511728.1 | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| KAI0513360.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0513582.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| KAI0514222.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| KAI0514330.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| KAI0516272.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| KAI0516598.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| KAI0518621.1 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| KAI0518955.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| KAI0519790.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0519792.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0520070.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| KAI0520477.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| KAI0520478.1 | Phenylpropanoid | POD | low | borderline | POD__00002__sp_A5H8G4_PER1_MAIZE |
| KAI0520479.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| KAI0522375.1 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| KAI0523007.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| KAI0523008.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| KAI0523471.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| KAI0525078.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| KAI0525127.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| KAI0525128.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| KAI0527248.1 | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| KAI0527397.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| KAI0527409.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| KAI0528557.1 | Phenylpropanoid | POD | medium | pass | POD__00015__sp_Q69SV0_APX8_ORYSJ |
| KAI0528883.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0528884.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0528885.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0528886.1 | Phenylpropanoid | POD | low | borderline | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0528986.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| KAI0528999.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| KAI0529001.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| KAI0529341.1 | Phenylpropanoid | POD | medium | pass | POD__00018__sp_Q8H0V5_OCP3_ARATH |
| KAI0530802.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| KAI0531089.1 | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| KAI0531191.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0531192.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| KAI0531193.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |