Dendrobium nobile (dendrobium_nobile)
Imported from atlas release summary for Dendrobium nobile.
1424
Candidate Protein Records
1248
Pathway-Level Records
3095
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3095
Family-Level Calls
C4H
6.85%
C3'H/CYP98A
6.04%
BAHD
5.07%
UGT
4.26%
7DLGT
3.97%
UFGT
3.84%
T3O
3.81%
4CL
3.68%
Other Families
62.46%
More Families (94)
IFS
107
3.46%
POD
98
3.17%
CYP76
97
3.13%
F3H
86
2.78%
DWF4/CYP90B1
83
2.68%
F3'H/CYP75B
76
2.46%
CYP71
70
2.26%
STR
69
2.23%
NMT
68
2.2%
CAD
62
2.0%
SMT1/SMT2/SMT3
52
1.68%
BR6OX2/CYP85A2
51
1.65%
TPS
50
1.62%
CAS
49
1.58%
GES
47
1.52%
CODM/T6ODM
41
1.32%
H6H
38
1.23%
IFR
38
1.23%
CYP90D1
36
1.16%
G8O/G8H
34
1.1%
GS
31
1.0%
SLS
31
1.0%
TRI/TRII
30
0.97%
PYKS
29
0.94%
LAC
27
0.87%
CSE
26
0.84%
NCS
23
0.74%
SGD
23
0.74%
T16H
23
0.74%
FNS
23
0.74%
RAS
22
0.71%
CCR
20
0.65%
ANR
17
0.55%
F5H/CYP84A
17
0.55%
CYP51G1
17
0.55%
HCT
16
0.52%
COMT
13
0.42%
ROT3/CYP90C1
13
0.42%
PMT
12
0.39%
IO
12
0.39%
8HGO
11
0.36%
CHS
11
0.36%
LAMT
10
0.32%
F3'5'H/CYP75A
10
0.32%
CCoAOMT
10
0.32%
MVD
9
0.29%
BBE
8
0.26%
7DLH
8
0.26%
16OMT
8
0.26%
COR
8
0.26%
DFR
8
0.26%
ANS/LDOX
8
0.26%
TAT
8
0.26%
BR6OX1/CYP85A1
8
0.26%
CNMT
7
0.23%
MPO
7
0.23%
CPR
7
0.23%
SQS/FDFT1
7
0.23%
DET2
7
0.23%
GGPPS
7
0.23%
TYDC_DDC
6
0.19%
PAL
6
0.19%
FPPS
6
0.19%
CPD/CYP90A1
5
0.16%
CYP719
4
0.13%
ISY
4
0.13%
DWF1
4
0.13%
HMGR
4
0.13%
DXS
4
0.13%
AACT
4
0.13%
ADC
3
0.1%
CHI
3
0.1%
HPPR
3
0.1%
HYD1
3
0.1%
IDI
3
0.1%
MVK
3
0.1%
SQE
2
0.06%
SMO1/SMO2
2
0.06%
DWF5
2
0.06%
MCT/IspD
2
0.06%
PMK
2
0.06%
HMGS
2
0.06%
TDC
1
0.03%
XMT_MXMT_DXMT
1
0.03%
CYP80B1
1
0.03%
ODC
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
DWF7
1
0.03%
CMK/IspE
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
HDR/IspH
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 361 | 19 | UGT (128) | View species results |
| Alkaloid pathway | 289 | 19 | 7DLGT (52) | View species results |
| Phenylpropanoid pathway | 227 | 11 | POD (91) | View species results |
| Flavonoid pathway | 176 | 9 | UFGT (116) | View species results |
| Rosmarinic acid pathway | 113 | 7 | C4H (57) | View species results |
| Steroid pathway | 82 | 15 | SMT1/SMT2/SMT3 (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1220 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 195 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| KAI0525109.1 | Terpenoid | CYP76 | medium | pass |
| KAI0525159.1 | Terpenoid | CYP76 | medium | borderline |
| KAI0525189.1 | Terpenoid | CYP76 | medium | pass |
| KAI0525249.1 | Terpenoid | CYP76 | low | borderline |
| KAI0527229.1 | Terpenoid | CYP76 | medium | borderline |
| KAI0527230.1 | Terpenoid | CYP76 | medium | pass |
| KAI0527475.1 | Terpenoid | CYP76 | medium | pass |
| KAI0527476.1 | Terpenoid | CYP76 | medium | pass |
| KAI0527477.1 | Terpenoid | CYP76 | medium | pass |
| KAI0527478.1 | Terpenoid | CYP76 | low | borderline |
| KAI0527479.1 | Terpenoid | CYP76 | medium | pass |
| KAI0527480.1 | Terpenoid | CYP76 | low | borderline |
| KAI0529257.1 | Terpenoid | CYP76 | medium | pass |
| KAI0529283.1 | Terpenoid | CYP76 | medium | pass |
| KAI0529284.1 | Terpenoid | CYP76 | medium | pass |
| KAI0530504.1 | Terpenoid | CYP76 | low | borderline |
| KAI0530574.1 | Terpenoid | CYP76 | medium | pass |
| KAI0523999.1 | Terpenoid | DXR | high | pass |
| KAI0489461.1 | Terpenoid | DXS | medium | pass |
| KAI0498272.1 | Terpenoid | DXS | low | borderline |
| KAI0500439.1 | Terpenoid | DXS | low | borderline |
| KAI0501586.1 | Terpenoid | DXS | medium | pass |
| KAI0489038.1 | Terpenoid | FPPS | medium | pass |
| KAI0497930.1 | Terpenoid | FPPS | medium | pass |
| KAI0498442.1 | Terpenoid | FPPS | medium | pass |
| KAI0513586.1 | Terpenoid | FPPS | medium | pass |
| KAI0514282.1 | Terpenoid | FPPS | medium | borderline |
| KAI0514284.1 | Terpenoid | FPPS | medium | borderline |
| KAI0492576.1 | Terpenoid | GGPPS | medium | borderline |
| KAI0493162.1 | Terpenoid | GGPPS | medium | borderline |
| KAI0493165.1 | Terpenoid | GGPPS | medium | borderline |
| KAI0498835.1 | Terpenoid | GGPPS | medium | borderline |
| KAI0498840.1 | Terpenoid | GGPPS | medium | borderline |
| KAI0520333.1 | Terpenoid | GGPPS | medium | borderline |
| KAI0525042.1 | Terpenoid | GGPPS | medium | borderline |
| KAI0523613.1 | Terpenoid | HDR/IspH | high | pass |
| KAI0510216.1 | Terpenoid | HDS/IspG | high | pass |
| KAI0488871.1 | Terpenoid | HMGR | medium | pass |
| KAI0501627.1 | Terpenoid | HMGR | medium | pass |
| KAI0524344.1 | Terpenoid | HMGR | low | borderline |
| KAI0524348.1 | Terpenoid | HMGR | low | borderline |
| KAI0502608.1 | Terpenoid | HMGS | high | pass |
| KAI0513981.1 | Terpenoid | HMGS | high | pass |
| KAI0492739.1 | Terpenoid | IDI | medium | pass |
| KAI0516000.1 | Terpenoid | IDI | medium | pass |
| KAI0524939.1 | Terpenoid | IDI | low | borderline |
| KAI0494980.1 | Terpenoid | MCT/IspD | low | borderline |
| KAI0510695.1 | Terpenoid | MCT/IspD | high | pass |
| KAI0514304.1 | Terpenoid | MDS/IspF | high | pass |
| KAI0485899.1 | Terpenoid | MVD | low | borderline |