PlantSME Plant secondary metabolism enzyme database

Dicranoloma chilense (dicranoloma_chilense)

Imported from atlas release summary for Dicranoloma chilense.

607
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.52% Terpenoid pathway 25.21% Alkaloid pathway 20.76% Flavonoid pathway 11.53% Rosmarinic acid pathway 10.21% Steroid pathway 5.77%
Family Distribution
C4H 6.25% C3'H/CYP98A 6.13% BAHD 5.41% POD 5.05% 4CL 4.51% CYP76 4.45% IFS 3.31% NMT 2.89%
Other Families 62.0%
More Families (96)
STR 45 2.71% GS 44 2.65% T3O 42 2.53% DWF4/CYP90B1 42 2.53% F3'H/CYP75B 37 2.22% F3H 37 2.22% BR6OX2/CYP85A2 36 2.16% IFR 33 1.98% IO 30 1.8% UFGT 30 1.8% UGT 30 1.8% 7DLGT 29 1.74% PYKS 27 1.62% CODM/T6ODM 27 1.62% PAL 27 1.62% CAD 23 1.38% COMT 22 1.32% TRI/TRII 19 1.14% H6H 19 1.14% LAC 18 1.08% SMT1/SMT2/SMT3 18 1.08% RAS 17 1.02% CYP71 16 0.96% F3'5'H/CYP75A 14 0.84% CHS 14 0.84% ANR 14 0.84% 16OMT 13 0.78% G8O/G8H 13 0.78% HCT 12 0.72% CAS 12 0.72% SLS 11 0.66% 7DLH 10 0.6% T16H 10 0.6% CPD/CYP90A1 10 0.6% CSE 9 0.54% CPR 9 0.54% CYP90D1 9 0.54% COR 8 0.48% 8HGO 8 0.48% BR6OX1/CYP85A1 8 0.48% SQS/FDFT1 8 0.48% PMT 7 0.42% SGD 7 0.42% BBE 7 0.42% NCS 7 0.42% CCR 7 0.42% DET2 7 0.42% CNMT 6 0.36% LAMT 6 0.36% TDC 5 0.3% F5H/CYP84A 5 0.3% DWF5 5 0.3% MVK 5 0.3% AACT 5 0.3% MPO 4 0.24% DFR 4 0.24% FPPS 4 0.24% MCT/IspD 4 0.24% ADC 3 0.18% CYP719 3 0.18% 6OMT_4OMT_SOMT 3 0.18% FNS 3 0.18% FLS 3 0.18% CHI 3 0.18% CCoAOMT 3 0.18% HPPR 3 0.18% TAT 3 0.18% ROT3/CYP90C1 3 0.18% GGPPS 3 0.18% HMGS 3 0.18% CMK/IspE 3 0.18% TYDC_DDC 2 0.12% ISY 2 0.12% GES 2 0.12% ANS/LDOX 2 0.12% SQE 2 0.12% DWF1 2 0.12% CYP51G1 2 0.12% DXR 2 0.12% HMGR 2 0.12% MVD 2 0.12% PMK 2 0.12% TPS 2 0.12% XMT_MXMT_DXMT 1 0.06% CYP80F1 1 0.06% CYP80B1 1 0.06% HYD1 1 0.06% FK 1 0.06% DWF7 1 0.06% SMO1/SMO2 1 0.06% CPI1 1 0.06% HDS/IspG 1 0.06% IDI 1 0.06% HDR/IspH 1 0.06% DXS 1 0.06% MDS/IspF 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 12 POD (76) View species results
Terpenoid pathway 153 19 BAHD (61) View species results
Alkaloid pathway 126 16 T3O (21) View species results
Flavonoid pathway 70 10 UFGT (23) View species results
Rosmarinic acid pathway 62 7 C4H (21) View species results
Steroid pathway 35 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 638 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 119 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
Dchi1124290021160 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1291610037680 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Dchi1313890046930 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Dchi1348030054630 Flavonoid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Dchi1489550071080 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Dchi1575200091080 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Dchi1575960091800 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Dchi1583040092880 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dchi1628020110660 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Dchi1671070143660 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dchi1674340151120 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Dchi1677570154850 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Dchi1679080160310 Flavonoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Dchi1681200162980 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1694460182960 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Dchi1696130188130 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Dchi1701650196560 Flavonoid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Dchi1708690218770 Flavonoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Dchi1709100219590 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1710380223730 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Dchi1710920226090 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1712020230070 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Dchi1717190245770 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Dchi1717190245780 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Dchi1717930247210 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1124290021160 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1291610037680 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Dchi1313890046930 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Dchi1348030054630 Phenylpropanoid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Dchi1489550071080 Phenylpropanoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Dchi1575200091080 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Dchi1575960091800 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Dchi1583040092880 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dchi1628020110660 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Dchi1671070143660 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Dchi1674340151120 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Dchi1677570154850 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Dchi1679080160310 Phenylpropanoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Dchi1681200162980 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1694460182960 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Dchi1696130188130 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Dchi1701650196560 Phenylpropanoid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Dchi1708690218770 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Dchi1709100219590 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1710380223730 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Dchi1710920226090 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Dchi1712020230070 Phenylpropanoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Dchi1717190245770 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Dchi1717190245780 Phenylpropanoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Dchi1717930247210 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH