PlantSME Plant secondary metabolism enzyme database

Dicranoloma chilense (dicranoloma_chilense)

Imported from atlas release summary for Dicranoloma chilense.

607
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.52% Terpenoid pathway 25.21% Alkaloid pathway 20.76% Flavonoid pathway 11.53% Rosmarinic acid pathway 10.21% Steroid pathway 5.77%
Family Distribution
C4H 6.25% C3'H/CYP98A 6.13% BAHD 5.41% POD 5.05% 4CL 4.51% CYP76 4.45% IFS 3.31% NMT 2.89%
Other Families 62.0%
More Families (96)
STR 45 2.71% GS 44 2.65% T3O 42 2.53% DWF4/CYP90B1 42 2.53% F3'H/CYP75B 37 2.22% F3H 37 2.22% BR6OX2/CYP85A2 36 2.16% IFR 33 1.98% IO 30 1.8% UFGT 30 1.8% UGT 30 1.8% 7DLGT 29 1.74% PYKS 27 1.62% CODM/T6ODM 27 1.62% PAL 27 1.62% CAD 23 1.38% COMT 22 1.32% TRI/TRII 19 1.14% H6H 19 1.14% LAC 18 1.08% SMT1/SMT2/SMT3 18 1.08% RAS 17 1.02% CYP71 16 0.96% F3'5'H/CYP75A 14 0.84% CHS 14 0.84% ANR 14 0.84% 16OMT 13 0.78% G8O/G8H 13 0.78% HCT 12 0.72% CAS 12 0.72% SLS 11 0.66% 7DLH 10 0.6% T16H 10 0.6% CPD/CYP90A1 10 0.6% CSE 9 0.54% CPR 9 0.54% CYP90D1 9 0.54% COR 8 0.48% 8HGO 8 0.48% BR6OX1/CYP85A1 8 0.48% SQS/FDFT1 8 0.48% PMT 7 0.42% SGD 7 0.42% BBE 7 0.42% NCS 7 0.42% CCR 7 0.42% DET2 7 0.42% CNMT 6 0.36% LAMT 6 0.36% TDC 5 0.3% F5H/CYP84A 5 0.3% DWF5 5 0.3% MVK 5 0.3% AACT 5 0.3% MPO 4 0.24% DFR 4 0.24% FPPS 4 0.24% MCT/IspD 4 0.24% ADC 3 0.18% CYP719 3 0.18% 6OMT_4OMT_SOMT 3 0.18% FNS 3 0.18% FLS 3 0.18% CHI 3 0.18% CCoAOMT 3 0.18% HPPR 3 0.18% TAT 3 0.18% ROT3/CYP90C1 3 0.18% GGPPS 3 0.18% HMGS 3 0.18% CMK/IspE 3 0.18% TYDC_DDC 2 0.12% ISY 2 0.12% GES 2 0.12% ANS/LDOX 2 0.12% SQE 2 0.12% DWF1 2 0.12% CYP51G1 2 0.12% DXR 2 0.12% HMGR 2 0.12% MVD 2 0.12% PMK 2 0.12% TPS 2 0.12% XMT_MXMT_DXMT 1 0.06% CYP80F1 1 0.06% CYP80B1 1 0.06% HYD1 1 0.06% FK 1 0.06% DWF7 1 0.06% SMO1/SMO2 1 0.06% CPI1 1 0.06% HDS/IspG 1 0.06% IDI 1 0.06% HDR/IspH 1 0.06% DXS 1 0.06% MDS/IspF 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 12 POD (76) View species results
Terpenoid pathway 153 19 BAHD (61) View species results
Alkaloid pathway 126 16 T3O (21) View species results
Flavonoid pathway 70 10 UFGT (23) View species results
Rosmarinic acid pathway 62 7 C4H (21) View species results
Steroid pathway 35 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 638 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 119 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
Dchi1045000003330 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Dchi1632980116180 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
Dchi1661230136510 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
Dchi1692470178380 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
Dchi1703740203770 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Dchi1712520231710 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
Dchi1719060250360 Phenylpropanoid CCR medium pass CCR__00006__sp_Q6K9A2_CCR1_ORYSJ