PlantSME Plant secondary metabolism enzyme database

Dicranoloma chilense (dicranoloma_chilense)

Imported from atlas release summary for Dicranoloma chilense.

607
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.52% Terpenoid pathway 25.21% Alkaloid pathway 20.76% Flavonoid pathway 11.53% Rosmarinic acid pathway 10.21% Steroid pathway 5.77%
Family Distribution
C4H 6.25% C3'H/CYP98A 6.13% BAHD 5.41% POD 5.05% 4CL 4.51% CYP76 4.45% IFS 3.31% NMT 2.89%
Other Families 62.0%
More Families (96)
STR 45 2.71% GS 44 2.65% T3O 42 2.53% DWF4/CYP90B1 42 2.53% F3'H/CYP75B 37 2.22% F3H 37 2.22% BR6OX2/CYP85A2 36 2.16% IFR 33 1.98% IO 30 1.8% UFGT 30 1.8% UGT 30 1.8% 7DLGT 29 1.74% PYKS 27 1.62% CODM/T6ODM 27 1.62% PAL 27 1.62% CAD 23 1.38% COMT 22 1.32% TRI/TRII 19 1.14% H6H 19 1.14% LAC 18 1.08% SMT1/SMT2/SMT3 18 1.08% RAS 17 1.02% CYP71 16 0.96% F3'5'H/CYP75A 14 0.84% CHS 14 0.84% ANR 14 0.84% 16OMT 13 0.78% G8O/G8H 13 0.78% HCT 12 0.72% CAS 12 0.72% SLS 11 0.66% 7DLH 10 0.6% T16H 10 0.6% CPD/CYP90A1 10 0.6% CSE 9 0.54% CPR 9 0.54% CYP90D1 9 0.54% COR 8 0.48% 8HGO 8 0.48% BR6OX1/CYP85A1 8 0.48% SQS/FDFT1 8 0.48% PMT 7 0.42% SGD 7 0.42% BBE 7 0.42% NCS 7 0.42% CCR 7 0.42% DET2 7 0.42% CNMT 6 0.36% LAMT 6 0.36% TDC 5 0.3% F5H/CYP84A 5 0.3% DWF5 5 0.3% MVK 5 0.3% AACT 5 0.3% MPO 4 0.24% DFR 4 0.24% FPPS 4 0.24% MCT/IspD 4 0.24% ADC 3 0.18% CYP719 3 0.18% 6OMT_4OMT_SOMT 3 0.18% FNS 3 0.18% FLS 3 0.18% CHI 3 0.18% CCoAOMT 3 0.18% HPPR 3 0.18% TAT 3 0.18% ROT3/CYP90C1 3 0.18% GGPPS 3 0.18% HMGS 3 0.18% CMK/IspE 3 0.18% TYDC_DDC 2 0.12% ISY 2 0.12% GES 2 0.12% ANS/LDOX 2 0.12% SQE 2 0.12% DWF1 2 0.12% CYP51G1 2 0.12% DXR 2 0.12% HMGR 2 0.12% MVD 2 0.12% PMK 2 0.12% TPS 2 0.12% XMT_MXMT_DXMT 1 0.06% CYP80F1 1 0.06% CYP80B1 1 0.06% HYD1 1 0.06% FK 1 0.06% DWF7 1 0.06% SMO1/SMO2 1 0.06% CPI1 1 0.06% HDS/IspG 1 0.06% IDI 1 0.06% HDR/IspH 1 0.06% DXS 1 0.06% MDS/IspF 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 12 POD (76) View species results
Terpenoid pathway 153 19 BAHD (61) View species results
Alkaloid pathway 126 16 T3O (21) View species results
Flavonoid pathway 70 10 UFGT (23) View species results
Rosmarinic acid pathway 62 7 C4H (21) View species results
Steroid pathway 35 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 638 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 119 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
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Gene Pathway Family Confidence Status
Dchi1039080001340 Rosmarinic Acid CPR medium pass
Dchi1127480023700 Rosmarinic Acid CPR medium pass
Dchi1633140116700 Rosmarinic Acid CPR low borderline
Dchi1656560129950 Rosmarinic Acid CPR low borderline
Dchi1678850159780 Rosmarinic Acid CPR medium pass
Dchi1706730212290 Rosmarinic Acid CPR low borderline
Dchi1711720228790 Rosmarinic Acid CPR medium pass
Dchi1712180230410 Rosmarinic Acid CPR low borderline
Dchi1712500231630 Rosmarinic Acid CPR medium pass