PlantSME Plant secondary metabolism enzyme database

Fragaria chiloensis (fragaria_chiloensis)

Imported from atlas release summary for Fragaria chiloensis.

5280
Candidate Protein Records
4280
Pathway-Level Records
10728
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1297 20 BAHD (475) View species results
Alkaloid pathway 966 27 7DLGT (141) View species results
Phenylpropanoid pathway 887 13 POD (324) View species results
Flavonoid pathway 464 14 UFGT (273) View species results
Rosmarinic acid pathway 358 7 C4H (167) View species results
Steroid pathway 308 13 CAS (117) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4247 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 756 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
fragaria_chiloensis_maker-6B-augustus-gene-75.93-mRNA-1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
fragaria_chiloensis_maker-6C-augustus-gene-313.168-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-6C-augustus-gene-314.108-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-6C-augustus-gene-59.114-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-6D-augustus-gene-113.146-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-6D-augustus-gene-267.111-mRNA-1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
fragaria_chiloensis_maker-6D-augustus-gene-285.22-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-6D-augustus-gene-285.25-mRNA-1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-6D-augustus-gene-286.8-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-6D-augustus-gene-295.159-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-6D-augustus-gene-320.107-mRNA-1 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
fragaria_chiloensis_maker-7A-augustus-gene-101.2-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7A-augustus-gene-224.1-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-7A-augustus-gene-62.8-mRNA-1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
fragaria_chiloensis_maker-7A-exonerate_protein2genome-gene-12.43-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7A-exonerate_protein2genome-gene-132.18-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7B-augustus-gene-154.72-mRNA-1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
fragaria_chiloensis_maker-7B-augustus-gene-154.73-mRNA-1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
fragaria_chiloensis_maker-7B-augustus-gene-212.0-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7B-augustus-gene-212.1-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7B-augustus-gene-212.2-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7B-augustus-gene-212.3-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7B-augustus-gene-212.5-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7B-augustus-gene-3.15-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-7C-augustus-gene-110.15-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7C-augustus-gene-13.2-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7C-augustus-gene-13.5-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7C-augustus-gene-13.6-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7C-augustus-gene-195.136-mRNA-1 Phenylpropanoid CAD low borderline CAD__00016__sp_Q9SJ10_CADH3_ARATH
fragaria_chiloensis_maker-7C-augustus-gene-229.14-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-7C-augustus-gene-230.178-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
fragaria_chiloensis_maker-7D-augustus-gene-118.95-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7D-augustus-gene-195.0-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7D-augustus-gene-195.1-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7D-augustus-gene-195.2-mRNA-1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
fragaria_chiloensis_maker-7D-augustus-gene-3.26-mRNA-1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM