PlantSME Plant secondary metabolism enzyme database

Gossypium stocksii (gossypium_stocksii)

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Imported from atlas release summary for Gossypium stocksii.

1880
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 21 BAHD (199) View species results
Alkaloid pathway 421 20 7DLGT (76) View species results
Phenylpropanoid pathway 419 11 POD (175) View species results
Flavonoid pathway 217 8 UFGT (147) View species results
Rosmarinic acid pathway 149 7 C4H (69) View species results
Steroid pathway 128 12 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2015 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 351 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
gossypium_stocksii_Gsto_01G024420.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
gossypium_stocksii_Gsto_02G004690.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
gossypium_stocksii_Gsto_02G006320.1 Phenylpropanoid CCR medium borderline CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
gossypium_stocksii_Gsto_03G001540.1 Phenylpropanoid CCR low borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
gossypium_stocksii_Gsto_04G017040.1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
gossypium_stocksii_Gsto_05G016330.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
gossypium_stocksii_Gsto_05G016340.1 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
gossypium_stocksii_Gsto_05G025480.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
gossypium_stocksii_Gsto_05G033390.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
gossypium_stocksii_Gsto_05G041530.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
gossypium_stocksii_Gsto_06G009910.2 Phenylpropanoid CCR low borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
gossypium_stocksii_Gsto_07G008500.1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
gossypium_stocksii_Gsto_07G017210.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
gossypium_stocksii_Gsto_07G017220.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
gossypium_stocksii_Gsto_07G017240.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
gossypium_stocksii_Gsto_08G006110.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
gossypium_stocksii_Gsto_08G011210.1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
gossypium_stocksii_Gsto_08G019530.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
gossypium_stocksii_Gsto_09G025490.1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
gossypium_stocksii_Gsto_10G014180.1 Phenylpropanoid CCR low borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
gossypium_stocksii_Gsto_10G019920.1 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
gossypium_stocksii_Gsto_12G026870.1 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH