PlantSME Plant secondary metabolism enzyme database

Gossypium stocksii (gossypium_stocksii)

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Imported from atlas release summary for Gossypium stocksii.

1880
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 21 BAHD (199) View species results
Alkaloid pathway 421 20 7DLGT (76) View species results
Phenylpropanoid pathway 419 11 POD (175) View species results
Flavonoid pathway 217 8 UFGT (147) View species results
Rosmarinic acid pathway 149 7 C4H (69) View species results
Steroid pathway 128 12 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2015 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 351 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
gossypium_stocksii_Gsto_01G019930.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_01G024050.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_02G011260.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_03G008050.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_03G011070.1 Alkaloid IO low borderline
gossypium_stocksii_Gsto_04G009190.2 Alkaloid IO medium pass
gossypium_stocksii_Gsto_05G017960.1 Alkaloid IO low borderline
gossypium_stocksii_Gsto_05G024890.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_05G034470.1 Alkaloid IO medium pass
gossypium_stocksii_Gsto_05G038890.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_05G041680.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_06G019080.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_06G026620.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_07G013980.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_07G014790.1 Alkaloid IO low borderline
gossypium_stocksii_Gsto_07G023420.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_08G014760.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_08G016960.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_09G005750.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_09G011770.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_09G013600.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_09G025350.1 Alkaloid IO low borderline
gossypium_stocksii_Gsto_10G028950.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_10G028960.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_11G040870.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_12G001400.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_12G001420.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_12G001880.1 Alkaloid IO low borderline
gossypium_stocksii_Gsto_12G018030.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_12G027800.1 Alkaloid IO low borderline
gossypium_stocksii_Gsto_12G029670.1 Alkaloid IO low borderline
gossypium_stocksii_Gsto_13G015940.1 Alkaloid IO medium borderline
gossypium_stocksii_Gsto_13G016270.1 Alkaloid IO medium borderline