Gynandropsis gynandra (gynandropsis_gynandra)
Imported from atlas release summary for Gynandropsis gynandra.
1590
Candidate Protein Records
1225
Pathway-Level Records
3102
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3102
Family-Level Calls
C3'H/CYP98A
6.29%
C4H
6.25%
BAHD
6.0%
CYP76
4.26%
POD
4.19%
IFS
4.13%
4CL
3.19%
T3O
3.16%
Other Families
62.54%
More Families (97)
UGT
92
2.97%
NMT
90
2.9%
7DLGT
85
2.74%
UFGT
79
2.55%
DWF4/CYP90B1
79
2.55%
BR6OX2/CYP85A2
75
2.42%
F3H
61
1.97%
F3'H/CYP75B
57
1.84%
STR
56
1.81%
CYP71
50
1.61%
CAS
48
1.55%
CSE
47
1.52%
TRI/TRII
44
1.42%
CODM/T6ODM
43
1.39%
SMT1/SMT2/SMT3
41
1.32%
SGD
39
1.26%
IFR
38
1.23%
PYKS
37
1.19%
CAD
37
1.19%
HCT
35
1.13%
LAC
35
1.13%
T16H
30
0.97%
H6H
29
0.93%
IO
28
0.9%
COMT
28
0.9%
RAS
26
0.84%
SLS
25
0.81%
TPS
24
0.77%
GS
22
0.71%
F5H/CYP84A
22
0.71%
GES
21
0.68%
G8O/G8H
21
0.68%
CYP90D1
20
0.64%
ANR
19
0.61%
PMT
18
0.58%
F3'5'H/CYP75A
18
0.58%
FNS
18
0.58%
TAT
18
0.58%
CCR
17
0.55%
BBE
16
0.52%
16OMT
15
0.48%
CYP51G1
15
0.48%
LAMT
14
0.45%
DXS
14
0.45%
8HGO
13
0.42%
FPPS
13
0.42%
CNMT
12
0.39%
NCS
11
0.35%
CYP719
11
0.35%
7DLH
11
0.35%
CPR
11
0.35%
BR6OX1/CYP85A1
11
0.35%
CPD/CYP90A1
11
0.35%
ANS/LDOX
10
0.32%
MPO
9
0.29%
PAL
9
0.29%
DWF5
9
0.29%
GGPPS
9
0.29%
COR
8
0.26%
SQE
8
0.26%
AACT
8
0.26%
ROT3/CYP90C1
7
0.23%
HMGR
7
0.23%
CHS
6
0.19%
DFR
6
0.19%
CHI
6
0.19%
SQS/FDFT1
6
0.19%
MDS/IspF
6
0.19%
MVK
6
0.19%
CYP80B1
5
0.16%
CCoAOMT
5
0.16%
HPPR
5
0.16%
DET2
5
0.16%
ADC
4
0.13%
TDC
4
0.13%
DWF7
4
0.13%
SMO1/SMO2
4
0.13%
FLS
3
0.1%
MVD
3
0.1%
ISY
2
0.06%
TYDC_DDC
2
0.06%
DWF1
2
0.06%
HYD1
2
0.06%
DXR
2
0.06%
PMK
2
0.06%
IDI
2
0.06%
HMGS
2
0.06%
MCT/IspD
2
0.06%
HDR/IspH
2
0.06%
XMT_MXMT_DXMT
1
0.03%
ODC
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
CYP80F1
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
HDS/IspG
1
0.03%
CMK/IspE
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 378 | 19 | BAHD (153) | View species results |
| Alkaloid pathway | 266 | 21 | NMT (47) | View species results |
| Phenylpropanoid pathway | 263 | 11 | POD (114) | View species results |
| Flavonoid pathway | 129 | 8 | UFGT (76) | View species results |
| Rosmarinic acid pathway | 105 | 7 | C4H (47) | View species results |
| Steroid pathway | 84 | 12 | CAS (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1244 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 247 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00007658.mRNA1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00008840.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00009488.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00009489.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00009492.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00009493.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00009494.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00010141.mRNA1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00010166.mRNA1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00010936.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00011051.mRNA1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00011247.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00011406.mRNA1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00011637.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00012745.mRNA1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00012846.mRNA1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00012947.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00013491.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00015005.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00019243.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00019244.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00021868.mRNA1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00026997.mRNA1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00027373.mRNA1 | Alkaloid | TRI/TRII | medium | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00029348.mRNA1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00029351.mRNA1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00000121.mRNA1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00002__sp_A0A0S2PM92_TCS1F_CAMCR |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00000940.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00001796.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00001918.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00001972.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00001973.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00002566.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00005582.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00005957.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00008131.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00008229.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00007__sp_Q42524_4CL1_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00008230.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00011814.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00012912.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00015249.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00015454.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00019253.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00020528.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00022920.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00023235.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00023313.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00024439.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00024552.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| gynandropsis_gynandra_Gyn_10X_HIC_v5_00024849.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |