Gypsophila paniculata (gypsophila_paniculata)
Imported from atlas release summary for Gypsophila paniculata.
1071
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1071
Candidate Genes
BAHD
6.96%
POD
5.51%
C3'H/CYP98A
5.07%
C4H
5.0%
UGT
4.15%
7DLGT
3.96%
UFGT
3.96%
4CL
3.77%
Other Families
61.62%
More Families (95)
F3H
93
3.44%
CYP76
83
3.07%
IFS
76
2.81%
NMT
72
2.66%
T3O
69
2.55%
CODM/T6ODM
63
2.33%
F3'H/CYP75B
52
1.92%
DWF4/CYP90B1
50
1.85%
STR
49
1.81%
H6H
49
1.81%
BR6OX2/CYP85A2
49
1.81%
RAS
39
1.44%
SMT1/SMT2/SMT3
38
1.41%
TRI/TRII
35
1.3%
HCT
34
1.26%
PYKS
31
1.15%
CAD
30
1.11%
CSE
29
1.07%
CYP71
29
1.07%
IFR
27
1.0%
LAC
27
1.0%
COMT
25
0.93%
PMT
23
0.85%
SGD
22
0.81%
CAS
22
0.81%
BBE
20
0.74%
7DLH
20
0.74%
CYP90D1
20
0.74%
G8O/G8H
19
0.7%
GS
18
0.67%
ANS/LDOX
18
0.67%
T16H
17
0.63%
TPS
17
0.63%
GES
16
0.59%
FNS
16
0.59%
CCR
16
0.59%
TAT
16
0.59%
IO
15
0.56%
ANR
15
0.56%
FPPS
15
0.56%
F5H/CYP84A
14
0.52%
SLS
13
0.48%
16OMT
13
0.48%
F3'5'H/CYP75A
13
0.48%
CYP51G1
13
0.48%
PAL
12
0.44%
NCS
10
0.37%
CHS
10
0.37%
DFR
10
0.37%
CPD/CYP90A1
10
0.37%
BR6OX1/CYP85A1
9
0.33%
COR
8
0.3%
8HGO
8
0.3%
CCoAOMT
8
0.3%
CPR
8
0.3%
ROT3/CYP90C1
8
0.3%
CNMT
7
0.26%
SQS/FDFT1
7
0.26%
AACT
7
0.26%
CYP719
6
0.22%
ISY
6
0.22%
HPPR
6
0.22%
LAMT
5
0.19%
FLS
5
0.19%
CHI
5
0.19%
SMO1/SMO2
5
0.19%
MPO
4
0.15%
DET2
4
0.15%
DWF7
4
0.15%
GGPPS
4
0.15%
DXS
4
0.15%
MVD
4
0.15%
DWF1
3
0.11%
SQE
3
0.11%
HMGS
3
0.11%
GPPS
3
0.11%
HMGR
3
0.11%
CYP80F1
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
CYP80B1
2
0.07%
TDC
2
0.07%
FK
2
0.07%
IDI
2
0.07%
PMK
2
0.07%
CMK/IspE
2
0.07%
ADC
1
0.04%
TYDC_DDC
1
0.04%
CPI1
1
0.04%
DWF5
1
0.04%
MCT/IspD
1
0.04%
MVK
1
0.04%
MDS/IspF
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 322 | 20 | BAHD (134) | View species results |
| Phenylpropanoid pathway | 245 | 11 | POD (128) | View species results |
| Alkaloid pathway | 207 | 19 | 7DLGT (32) | View species results |
| Flavonoid pathway | 154 | 11 | UFGT (99) | View species results |
| Rosmarinic acid pathway | 91 | 7 | C4H (28) | View species results |
| Steroid pathway | 52 | 10 | SMT1/SMT2/SMT3 (20) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 861 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 261 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| gypsophila_paniculata_Gpan01g00275.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| gypsophila_paniculata_Gpan01g00569.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| gypsophila_paniculata_Gpan02g00542.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gypsophila_paniculata_Gpan03g00287.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| gypsophila_paniculata_Gpan03g01052.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gypsophila_paniculata_Gpan03g01353.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gypsophila_paniculata_Gpan03g01449.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| gypsophila_paniculata_Gpan03g01450.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| gypsophila_paniculata_Gpan03g01452.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| gypsophila_paniculata_Gpan05g00146.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| gypsophila_paniculata_Gpan05g00407.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| gypsophila_paniculata_Gpan05g00416.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| gypsophila_paniculata_Gpan05g00564.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| gypsophila_paniculata_Gpan06g00760.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| gypsophila_paniculata_Gpan07g01079.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gypsophila_paniculata_Gpan08g00236.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| gypsophila_paniculata_Gpan08g01287.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| gypsophila_paniculata_Gpan11g00009.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| gypsophila_paniculata_Gpan11g00510.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| gypsophila_paniculata_Gpan12g01115.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| gypsophila_paniculata_Gpan13g00103.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| gypsophila_paniculata_Gpan13g00276.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gypsophila_paniculata_Gpan13g00928.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gypsophila_paniculata_Gpan13g01575.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| gypsophila_paniculata_Gpan13g01576.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| gypsophila_paniculata_Gpan13g01577.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| gypsophila_paniculata_Gpan13g01578.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| gypsophila_paniculata_Gpan14g00382.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| gypsophila_paniculata_Gpan14g00383.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| gypsophila_paniculata_Gpan15g00197.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| gypsophila_paniculata_Gpan15g00590.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| gypsophila_paniculata_Gpan15g00807.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| gypsophila_paniculata_Gpan16g00133.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| gypsophila_paniculata_Gpan16g01303.m1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| gypsophila_paniculata_Gpan17g01066.m1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |