PlantSME Plant secondary metabolism enzyme database

Hedwigia ciliata (hedwigia_ciliata)

Imported from atlas release summary for Hedwigia ciliata.

627
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 158 12 POD (78) View species results
Terpenoid pathway 147 19 BAHD (55) View species results
Alkaloid pathway 129 18 NMT (27) View species results
Flavonoid pathway 88 12 CHS (24) View species results
Rosmarinic acid pathway 65 7 C4H (24) View species results
Steroid pathway 40 14 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 104 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Hcilscaffold_10029750 Alkaloid CNMT low borderline
Hcilscaffold_40095450 Alkaloid CNMT low borderline
Hcilscaffold_50127730 Alkaloid CNMT low borderline
Hcilscaffold_70203520 Alkaloid CNMT medium borderline
Hcilscaffold_90226230 Alkaloid CNMT low borderline
Hcilscaffold_90233900 Alkaloid CNMT low borderline
Hcilscaffold_10000910 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_100035260 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_10018990 Alkaloid CODM/T6ODM medium pass
Hcilscaffold_20056130 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_20056160 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_20056460 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_20066620 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_20069870 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_220072400 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_30084160 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_40091970 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_40096230 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_70176390 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_70185440 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_70186940 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_70197150 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_70198800 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_80216100 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_80222750 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_90225290 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_90225960 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_90255160 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_90255180 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_90255230 Alkaloid CODM/T6ODM medium borderline
Hcilscaffold_10024420 Alkaloid COR medium pass
Hcilscaffold_10034200 Alkaloid COR medium pass
Hcilscaffold_20066290 Alkaloid COR medium pass
Hcilscaffold_40103130 Alkaloid COR medium pass
Hcilscaffold_40104210 Alkaloid COR low borderline
Hcilscaffold_70169910 Alkaloid COR medium pass
Hcilscaffold_70177870 Alkaloid COR medium pass
Hcilscaffold_90231660 Alkaloid COR medium pass
Hcilscaffold_10005360 Alkaloid CYP719 medium borderline
Hcilscaffold_20068400 Alkaloid CYP719 low borderline
Hcilscaffold_60146660 Alkaloid CYP719 medium borderline
Hcilscaffold_90251440 Alkaloid CYP719 medium borderline
Hcilscaffold_10015840 Alkaloid CYP80B1 low borderline
Hcilscaffold_90251430 Alkaloid CYP80B1 medium borderline
Hcilscaffold_80211880 Alkaloid CYP80F1 medium borderline
Hcilscaffold_100048940 Alkaloid G8O/G8H medium borderline
Hcilscaffold_10005510 Alkaloid G8O/G8H medium borderline
Hcilscaffold_10013380 Alkaloid G8O/G8H medium pass
Hcilscaffold_20062310 Alkaloid G8O/G8H medium borderline
Hcilscaffold_20065050 Alkaloid G8O/G8H medium borderline