PlantSME Plant secondary metabolism enzyme database

Hedwigia ciliata (hedwigia_ciliata)

Imported from atlas release summary for Hedwigia ciliata.

627
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 158 12 POD (78) View species results
Terpenoid pathway 147 19 BAHD (55) View species results
Alkaloid pathway 129 18 NMT (27) View species results
Flavonoid pathway 88 12 CHS (24) View species results
Rosmarinic acid pathway 65 7 C4H (24) View species results
Steroid pathway 40 14 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 104 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Hcilscaffold_80219080 Rosmarinic Acid C4H low borderline
Hcilscaffold_90226710 Rosmarinic Acid C4H low borderline
Hcilscaffold_90244050 Rosmarinic Acid C4H medium pass
Hcilscaffold_90244730 Rosmarinic Acid C4H medium pass
Hcilscaffold_90244740 Rosmarinic Acid C4H medium pass
Hcilscaffold_90251430 Rosmarinic Acid C4H low borderline
Hcilscaffold_90251740 Rosmarinic Acid C4H low borderline
Hcilscaffold_90255710 Rosmarinic Acid C4H low borderline
Hcilscaffold_90258120 Rosmarinic Acid C4H medium pass
Hcilscaffold_10023540 Rosmarinic Acid CPR medium pass
Hcilscaffold_50118330 Rosmarinic Acid CPR medium pass
Hcilscaffold_70164220 Rosmarinic Acid CPR low borderline
Hcilscaffold_70201440 Rosmarinic Acid CPR medium pass
Hcilscaffold_90244350 Rosmarinic Acid CPR medium pass
Hcilscaffold_90253070 Rosmarinic Acid CPR low borderline
Hcilscaffold_40113530 Rosmarinic Acid HPPR medium pass
Hcilscaffold_40115160 Rosmarinic Acid HPPR medium pass
Hcilscaffold_70159670 Rosmarinic Acid HPPR low borderline
Hcilscaffold_20065480 Rosmarinic Acid PAL medium pass
Hcilscaffold_30075760 Rosmarinic Acid PAL high pass
Hcilscaffold_50130730 Rosmarinic Acid PAL high pass
Hcilscaffold_60136700 Rosmarinic Acid PAL low borderline
Hcilscaffold_60141130 Rosmarinic Acid PAL low borderline
Hcilscaffold_60145920 Rosmarinic Acid PAL medium pass
Hcilscaffold_60145930 Rosmarinic Acid PAL high pass
Hcilscaffold_60154130 Rosmarinic Acid PAL high pass
Hcilscaffold_70162460 Rosmarinic Acid PAL high pass
Hcilscaffold_70162480 Rosmarinic Acid PAL medium pass
Hcilscaffold_70198670 Rosmarinic Acid PAL high pass
Hcilscaffold_80208640 Rosmarinic Acid PAL high pass
Hcilscaffold_90239270 Rosmarinic Acid PAL medium pass
Hcilscaffold_90239280 Rosmarinic Acid PAL medium pass
Hcilscaffold_90239330 Rosmarinic Acid PAL high pass
Hcilscaffold_90239380 Rosmarinic Acid PAL medium pass
Hcilscaffold_90239390 Rosmarinic Acid PAL medium pass
Hcilscaffold_10001970 Rosmarinic Acid RAS medium pass
Hcilscaffold_20059620 Rosmarinic Acid RAS low borderline
Hcilscaffold_20059640 Rosmarinic Acid RAS medium pass
Hcilscaffold_30078470 Rosmarinic Acid RAS low borderline
Hcilscaffold_30079940 Rosmarinic Acid RAS medium pass
Hcilscaffold_70183420 Rosmarinic Acid RAS medium pass
Hcilscaffold_70199040 Rosmarinic Acid RAS low borderline
Hcilscaffold_70199060 Rosmarinic Acid RAS low borderline
Hcilscaffold_90241390 Rosmarinic Acid RAS medium pass
Hcilscaffold_10009880 Rosmarinic Acid TAT low borderline
Hcilscaffold_10010000 Rosmarinic Acid TAT low borderline
Hcilscaffold_50120680 Rosmarinic Acid TAT medium pass
Hcilscaffold_70186970 Rosmarinic Acid TAT medium pass
Hcilscaffold_80216080 Rosmarinic Acid TAT medium pass