Hedwigia ciliata (hedwigia_ciliata)
Imported from atlas release summary for Hedwigia ciliata.
849
Candidate Protein Records
627
Pathway-Level Records
1567
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1567
Family-Level Calls
C4H
6.57%
POD
5.36%
C3'H/CYP98A
5.3%
BAHD
5.23%
4CL
4.98%
CYP76
4.59%
NMT
3.77%
PAL
3.25%
Other Families
60.94%
More Families (96)
IFS
39
2.49%
STR
36
2.3%
F3'H/CYP75B
36
2.3%
PYKS
35
2.23%
BR6OX2/CYP85A2
35
2.23%
GS
34
2.17%
F3H
34
2.17%
IFR
32
2.04%
T3O
28
1.79%
UGT
28
1.79%
IO
27
1.72%
DWF4/CYP90B1
25
1.6%
CODM/T6ODM
24
1.53%
UFGT
24
1.53%
CHS
24
1.53%
7DLGT
23
1.47%
CAD
21
1.34%
CYP71
21
1.34%
TRI/TRII
17
1.08%
G8O/G8H
16
1.02%
H6H
15
0.96%
SMT1/SMT2/SMT3
15
0.96%
T16H
14
0.89%
COMT
14
0.89%
F3'5'H/CYP75A
13
0.83%
HCT
13
0.83%
CAS
13
0.83%
LAC
12
0.77%
CPD/CYP90A1
11
0.7%
CSE
9
0.57%
RAS
9
0.57%
SLS
8
0.51%
NCS
8
0.51%
COR
8
0.51%
DWF5
8
0.51%
SGD
7
0.45%
PMT
7
0.45%
7DLH
7
0.45%
16OMT
7
0.45%
ANR
7
0.45%
F5H/CYP84A
7
0.45%
CCR
7
0.45%
CYP90D1
7
0.45%
CNMT
6
0.38%
FNS
6
0.38%
DFR
6
0.38%
CPR
6
0.38%
CYP51G1
6
0.38%
SQS/FDFT1
6
0.38%
TDC
5
0.32%
8HGO
5
0.32%
TAT
5
0.32%
FPPS
5
0.32%
AACT
5
0.32%
TPS
5
0.32%
GGPPS
5
0.32%
MPO
4
0.26%
CYP719
4
0.26%
GES
4
0.26%
LAMT
4
0.26%
CHI
4
0.26%
DET2
4
0.26%
ROT3/CYP90C1
4
0.26%
MVK
4
0.26%
DXS
4
0.26%
6OMT_4OMT_SOMT
3
0.19%
BBE
3
0.19%
ISY
3
0.19%
ANS/LDOX
3
0.19%
FLS
3
0.19%
HPPR
3
0.19%
BR6OX1/CYP85A1
3
0.19%
HDR/IspH
3
0.19%
HMGS
3
0.19%
MVD
3
0.19%
HDS/IspG
3
0.19%
CYP80B1
2
0.13%
XMT_MXMT_DXMT
2
0.13%
ADC
2
0.13%
TYDC_DDC
2
0.13%
CCoAOMT
2
0.13%
HYD1
2
0.13%
SQE
2
0.13%
SMO1/SMO2
2
0.13%
IDI
2
0.13%
MCT/IspD
2
0.13%
CYP80F1
1
0.06%
CPI1
1
0.06%
DWF7
1
0.06%
DWF1
1
0.06%
FK
1
0.06%
DXR
1
0.06%
MDS/IspF
1
0.06%
CMK/IspE
1
0.06%
HMGR
1
0.06%
PMK
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 158 | 12 | POD (78) | View species results |
| Terpenoid pathway | 147 | 19 | BAHD (55) | View species results |
| Alkaloid pathway | 129 | 18 | NMT (27) | View species results |
| Flavonoid pathway | 88 | 12 | CHS (24) | View species results |
| Rosmarinic acid pathway | 65 | 7 | C4H (24) | View species results |
| Steroid pathway | 40 | 14 | CAS (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 572 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 104 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Hcilscaffold_90244730 | Alkaloid | T3O | medium | borderline |
| Hcilscaffold_90244740 | Alkaloid | T3O | medium | borderline |
| Hcilscaffold_90246360 | Alkaloid | T3O | medium | pass |
| Hcilscaffold_90250910 | Alkaloid | T3O | low | borderline |
| Hcilscaffold_40108800 | Alkaloid | TDC | low | borderline |
| Hcilscaffold_40114840 | Alkaloid | TDC | low | borderline |
| Hcilscaffold_60139790 | Alkaloid | TDC | low | borderline |
| Hcilscaffold_70166120 | Alkaloid | TDC | low | borderline |
| Hcilscaffold_70169940 | Alkaloid | TDC | low | borderline |
| Hcilscaffold_10002240 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_100042450 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_10024590 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_10033670 | Alkaloid | TRI/TRII | medium | pass |
| Hcilscaffold_20070280 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_20070290 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_40109980 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_50131360 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_50132010 | Alkaloid | TRI/TRII | medium | pass |
| Hcilscaffold_50133170 | Alkaloid | TRI/TRII | medium | pass |
| Hcilscaffold_70176720 | Alkaloid | TRI/TRII | medium | pass |
| Hcilscaffold_70188060 | Alkaloid | TRI/TRII | medium | pass |
| Hcilscaffold_80204870 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_80209640 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_80218490 | Alkaloid | TRI/TRII | medium | pass |
| Hcilscaffold_90233760 | Alkaloid | TRI/TRII | low | borderline |
| Hcilscaffold_90249760 | Alkaloid | TRI/TRII | medium | pass |
| Hcilscaffold_40114830 | Alkaloid | TYDC_DDC | medium | borderline |
| Hcilscaffold_70157190 | Alkaloid | TYDC_DDC | medium | borderline |
| Hcilscaffold_20054400 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Hcilscaffold_50116100 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Hcilscaffold_100035480 | Flavonoid | 4CL | medium | pass |
| Hcilscaffold_100035840 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_100049220 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_10015410 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_10031860 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_10033400 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_20060460 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_30083050 | Flavonoid | 4CL | medium | pass |
| Hcilscaffold_40102430 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_40114980 | Flavonoid | 4CL | medium | pass |
| Hcilscaffold_50128850 | Flavonoid | 4CL | medium | pass |
| Hcilscaffold_60138130 | Flavonoid | 4CL | medium | pass |
| Hcilscaffold_70175880 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_70175890 | Flavonoid | 4CL | medium | pass |
| Hcilscaffold_70176250 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_70179370 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_70184090 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_70186510 | Flavonoid | 4CL | low | borderline |
| Hcilscaffold_70189500 | Flavonoid | 4CL | medium | pass |
| Hcilscaffold_70191630 | Flavonoid | 4CL | medium | pass |