PlantSME Plant secondary metabolism enzyme database

Heliophila variabilis (heliophila_variabilis)

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Imported from atlas release summary for Heliophila variabilis.

1810
Candidate Protein Records
1415
Pathway-Level Records
3449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.89% Alkaloid pathway 23.53% Phenylpropanoid pathway 22.47% Flavonoid pathway 12.37% Steroid pathway 6.08% Rosmarinic acid pathway 5.65%
Family Distribution
C4H 6.7% BAHD 6.35% C3'H/CYP98A 5.16% POD 4.81% CYP76 3.97% 4CL 3.74% UGT 3.51% UFGT 3.48%
Other Families 62.28%
More Families (98)
NMT 118 3.42% 7DLGT 118 3.42% F3H 98 2.84% IFS 94 2.73% STR 73 2.12% CODM/T6ODM 64 1.86% T3O 62 1.8% DWF4/CYP90B1 60 1.74% F3'H/CYP75B 58 1.68% CSE 51 1.48% SMT1/SMT2/SMT3 50 1.45% TPS 50 1.45% G8O/G8H 48 1.39% SGD 48 1.39% CAD 48 1.39% BR6OX2/CYP85A2 47 1.36% FNS 43 1.25% CAS 43 1.25% H6H 40 1.16% T16H 40 1.16% GES 40 1.16% PYKS 38 1.1% TRI/TRII 38 1.1% IFR 38 1.1% SLS 37 1.07% COMT 36 1.04% CYP71 34 0.99% LAC 31 0.9% TAT 29 0.84% F5H/CYP84A 25 0.72% HCT 24 0.7% LAMT 23 0.67% GS 23 0.67% ANR 23 0.67% BBE 22 0.64% PAL 21 0.61% CCR 19 0.55% CYP90D1 19 0.55% IO 17 0.49% BR6OX1/CYP85A1 16 0.46% GGPPS 16 0.46% F3'5'H/CYP75A 15 0.43% 7DLH 14 0.41% ANS/LDOX 14 0.41% RAS 13 0.38% FPPS 13 0.38% NCS 12 0.35% ROT3/CYP90C1 12 0.35% PMT 11 0.32% COR 11 0.32% 8HGO 11 0.32% MPO 9 0.26% HPPR 9 0.26% CPR 9 0.26% SQE 9 0.26% DFR 8 0.23% SQS/FDFT1 8 0.23% AACT 8 0.23% CNMT 7 0.2% CYP80F1 7 0.2% CYP80B1 7 0.2% CCoAOMT 7 0.2% CPD/CYP90A1 7 0.2% SMO1/SMO2 7 0.2% CHS 6 0.17% MVD 6 0.17% MVK 6 0.17% CYP719 5 0.14% DET2 5 0.14% DWF7 5 0.14% ADC 4 0.12% TDC 4 0.12% PMK 4 0.12% ODC 3 0.09% TYDC_DDC 3 0.09% 16OMT 3 0.09% CHI 3 0.09% MCT/IspD 3 0.09% DXS 3 0.09% HDR/IspH 3 0.09% HMGS 3 0.09% IDI 3 0.09% GPPS 3 0.09% ISY 2 0.06% XMT_MXMT_DXMT 2 0.06% 6OMT_4OMT_SOMT 2 0.06% FLS 2 0.06% CYP51G1 2 0.06% DWF1 2 0.06% HMGR 2 0.06% CMK/IspE 2 0.06% DWF5 1 0.03% HYD1 1 0.03% CPI1 1 0.03% FK 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03% DXR 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 423 19 BAHD (163) View species results
Alkaloid pathway 333 23 NMT (62) View species results
Phenylpropanoid pathway 318 13 POD (140) View species results
Flavonoid pathway 175 13 UFGT (116) View species results
Steroid pathway 86 11 SMT1/SMT2/SMT3 (34) View species results
Rosmarinic acid pathway 80 7 4CL (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1172 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 256 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
heliophila_variabilis_HV10G013710 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
heliophila_variabilis_HV10G014180 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
heliophila_variabilis_HV10G018780 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
heliophila_variabilis_HV10G021660 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
heliophila_variabilis_HV10G021740 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
heliophila_variabilis_HV10G022960 Terpenoid BAHD medium pass BAHD__00075__sp_Q9FJB4_GPC1_ARATH
heliophila_variabilis_HV11G000410 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
heliophila_variabilis_HV11G004090 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
heliophila_variabilis_HV11G009900 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
heliophila_variabilis_HV11G010190 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
heliophila_variabilis_HV11G011980 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
heliophila_variabilis_HV11G012850 Terpenoid BAHD medium pass BAHD__00079__sp_Q9LIE4_ZDHC8_ARATH
heliophila_variabilis_HV11G014860 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
heliophila_variabilis_HV11G016490 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
heliophila_variabilis_HV11G018420 Terpenoid BAHD medium pass BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
heliophila_variabilis_HV11G019450 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
heliophila_variabilis_HV11G025350 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
heliophila_variabilis_HV11G025360 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
heliophila_variabilis_HV11G028450 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA