Heliophila variabilis (heliophila_variabilis)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.89% Alkaloid pathway 23.53% Phenylpropanoid pathway 22.47% Flavonoid pathway 12.37% Steroid pathway 6.08% Rosmarinic acid pathway 5.65%

Family Distribution

1415 Candidate Genes

C4H 6.7% BAHD 6.35% C3'H/CYP98A 5.16% POD 4.81% CYP76 3.97% 4CL 3.74% UGT 3.51% UFGT 3.48%

Other Families 62.28%

More Families (98)

NMT 118 3.42% 7DLGT 118 3.42% F3H 98 2.84% IFS 94 2.73% STR 73 2.12% CODM/T6ODM 64 1.86% T3O 62 1.8% DWF4/CYP90B1 60 1.74% F3'H/CYP75B 58 1.68% CSE 51 1.48% SMT1/SMT2/SMT3 50 1.45% TPS 50 1.45% G8O/G8H 48 1.39% SGD 48 1.39% CAD 48 1.39% BR6OX2/CYP85A2 47 1.36% FNS 43 1.25% CAS 43 1.25% H6H 40 1.16% T16H 40 1.16% GES 40 1.16% PYKS 38 1.1% TRI/TRII 38 1.1% IFR 38 1.1% SLS 37 1.07% COMT 36 1.04% CYP71 34 0.99% LAC 31 0.9% TAT 29 0.84% F5H/CYP84A 25 0.72% HCT 24 0.7% LAMT 23 0.67% GS 23 0.67% ANR 23 0.67% BBE 22 0.64% PAL 21 0.61% CCR 19 0.55% CYP90D1 19 0.55% IO 17 0.49% BR6OX1/CYP85A1 16 0.46% GGPPS 16 0.46% F3'5'H/CYP75A 15 0.43% 7DLH 14 0.41% ANS/LDOX 14 0.41% RAS 13 0.38% FPPS 13 0.38% NCS 12 0.35% ROT3/CYP90C1 12 0.35% PMT 11 0.32% COR 11 0.32% 8HGO 11 0.32% MPO 9 0.26% HPPR 9 0.26% CPR 9 0.26% SQE 9 0.26% DFR 8 0.23% SQS/FDFT1 8 0.23% AACT 8 0.23% CNMT 7 0.2% CYP80F1 7 0.2% CYP80B1 7 0.2% CCoAOMT 7 0.2% CPD/CYP90A1 7 0.2% SMO1/SMO2 7 0.2% CHS 6 0.17% MVD 6 0.17% MVK 6 0.17% CYP719 5 0.14% DET2 5 0.14% DWF7 5 0.14% ADC 4 0.12% TDC 4 0.12% PMK 4 0.12% ODC 3 0.09% TYDC_DDC 3 0.09% 16OMT 3 0.09% CHI 3 0.09% MCT/IspD 3 0.09% DXS 3 0.09% HDR/IspH 3 0.09% HMGS 3 0.09% IDI 3 0.09% GPPS 3 0.09% ISY 2 0.06% XMT_MXMT_DXMT 2 0.06% 6OMT_4OMT_SOMT 2 0.06% FLS 2 0.06% CYP51G1 2 0.06% DWF1 2 0.06% HMGR 2 0.06% CMK/IspE 2 0.06% DWF5 1 0.03% HYD1 1 0.03% CPI1 1 0.03% FK 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03% DXR 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	423	19	BAHD (163)	View species results
Alkaloid pathway	333	23	NMT (62)	View species results
Phenylpropanoid pathway	318	13	POD (140)	View species results
Flavonoid pathway	175	13	UFGT (116)	View species results
Steroid pathway	86	11	SMT1/SMT2/SMT3 (34)	View species results
Rosmarinic acid pathway	80	7	4CL (27)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1172	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	256	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: PAL

Gene	Pathway	Family	Confidence	Status	Best Target
heliophila_variabilis_HV01G019240	Flavonoid	PAL	high	pass	PAL__00002__sp_P35510_PAL1_ARATH
heliophila_variabilis_HV02G013710	Flavonoid	PAL	high	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV02G039170	Flavonoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
heliophila_variabilis_HV06G000490	Flavonoid	PAL	high	pass	PAL__00004__sp_P45725_PAL3_ARATH
heliophila_variabilis_HV09G005210	Flavonoid	PAL	high	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV09G005280	Flavonoid	PAL	medium	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV09G008780	Flavonoid	PAL	low	borderline	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV01G019240	Phenylpropanoid	PAL	high	pass	PAL__00002__sp_P35510_PAL1_ARATH
heliophila_variabilis_HV02G013710	Phenylpropanoid	PAL	high	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV02G039170	Phenylpropanoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
heliophila_variabilis_HV06G000490	Phenylpropanoid	PAL	high	pass	PAL__00004__sp_P45725_PAL3_ARATH
heliophila_variabilis_HV09G005210	Phenylpropanoid	PAL	high	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV09G005280	Phenylpropanoid	PAL	medium	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV09G008780	Phenylpropanoid	PAL	low	borderline	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV01G019240	Rosmarinic Acid	PAL	high	pass	PAL__00002__sp_P35510_PAL1_ARATH
heliophila_variabilis_HV02G013710	Rosmarinic Acid	PAL	high	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV02G039170	Rosmarinic Acid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
heliophila_variabilis_HV06G000490	Rosmarinic Acid	PAL	high	pass	PAL__00004__sp_P45725_PAL3_ARATH
heliophila_variabilis_HV09G005210	Rosmarinic Acid	PAL	high	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV09G005280	Rosmarinic Acid	PAL	medium	pass	PAL__00003__sp_P45724_PAL2_ARATH
heliophila_variabilis_HV09G008780	Rosmarinic Acid	PAL	low	borderline	PAL__00003__sp_P45724_PAL2_ARATH