Heliophila variabilis (heliophila_variabilis)
/
Imported from atlas release summary for Heliophila variabilis.
1415
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1415
Candidate Genes
C4H
6.7%
BAHD
6.35%
C3'H/CYP98A
5.16%
POD
4.81%
CYP76
3.97%
4CL
3.74%
UGT
3.51%
UFGT
3.48%
Other Families
62.28%
More Families (98)
NMT
118
3.42%
7DLGT
118
3.42%
F3H
98
2.84%
IFS
94
2.73%
STR
73
2.12%
CODM/T6ODM
64
1.86%
T3O
62
1.8%
DWF4/CYP90B1
60
1.74%
F3'H/CYP75B
58
1.68%
CSE
51
1.48%
SMT1/SMT2/SMT3
50
1.45%
TPS
50
1.45%
G8O/G8H
48
1.39%
SGD
48
1.39%
CAD
48
1.39%
BR6OX2/CYP85A2
47
1.36%
FNS
43
1.25%
CAS
43
1.25%
H6H
40
1.16%
T16H
40
1.16%
GES
40
1.16%
PYKS
38
1.1%
TRI/TRII
38
1.1%
IFR
38
1.1%
SLS
37
1.07%
COMT
36
1.04%
CYP71
34
0.99%
LAC
31
0.9%
TAT
29
0.84%
F5H/CYP84A
25
0.72%
HCT
24
0.7%
LAMT
23
0.67%
GS
23
0.67%
ANR
23
0.67%
BBE
22
0.64%
PAL
21
0.61%
CCR
19
0.55%
CYP90D1
19
0.55%
IO
17
0.49%
BR6OX1/CYP85A1
16
0.46%
GGPPS
16
0.46%
F3'5'H/CYP75A
15
0.43%
7DLH
14
0.41%
ANS/LDOX
14
0.41%
RAS
13
0.38%
FPPS
13
0.38%
NCS
12
0.35%
ROT3/CYP90C1
12
0.35%
PMT
11
0.32%
COR
11
0.32%
8HGO
11
0.32%
MPO
9
0.26%
HPPR
9
0.26%
CPR
9
0.26%
SQE
9
0.26%
DFR
8
0.23%
SQS/FDFT1
8
0.23%
AACT
8
0.23%
CNMT
7
0.2%
CYP80F1
7
0.2%
CYP80B1
7
0.2%
CCoAOMT
7
0.2%
CPD/CYP90A1
7
0.2%
SMO1/SMO2
7
0.2%
CHS
6
0.17%
MVD
6
0.17%
MVK
6
0.17%
CYP719
5
0.14%
DET2
5
0.14%
DWF7
5
0.14%
ADC
4
0.12%
TDC
4
0.12%
PMK
4
0.12%
ODC
3
0.09%
TYDC_DDC
3
0.09%
16OMT
3
0.09%
CHI
3
0.09%
MCT/IspD
3
0.09%
DXS
3
0.09%
HDR/IspH
3
0.09%
HMGS
3
0.09%
IDI
3
0.09%
GPPS
3
0.09%
ISY
2
0.06%
XMT_MXMT_DXMT
2
0.06%
6OMT_4OMT_SOMT
2
0.06%
FLS
2
0.06%
CYP51G1
2
0.06%
DWF1
2
0.06%
HMGR
2
0.06%
CMK/IspE
2
0.06%
DWF5
1
0.03%
HYD1
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
MDS/IspF
1
0.03%
HDS/IspG
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 423 | 19 | BAHD (163) | View species results |
| Alkaloid pathway | 333 | 23 | NMT (62) | View species results |
| Phenylpropanoid pathway | 318 | 13 | POD (140) | View species results |
| Flavonoid pathway | 175 | 13 | UFGT (116) | View species results |
| Steroid pathway | 86 | 11 | SMT1/SMT2/SMT3 (34) | View species results |
| Rosmarinic acid pathway | 80 | 7 | 4CL (27) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1172 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 256 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| heliophila_variabilis_HV01G013750 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV01G026530 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV01G029450 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV01G029560 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV01G029570 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV02G008160 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV02G018850 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV02G028520 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV02G031520 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV02G035280 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV03G001170 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV03G004170 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV03G009370 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV04G002410 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV04G005540 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV04G006560 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV04G015020 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV04G016630 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV04G022950 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV04G025920 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV04G032040 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV04G032070 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV05G004610 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV05G005720 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV05G009760 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV05G013710 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV05G013720 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV05G014200 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV05G014210 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV05G014230 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV05G032360 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV06G008340 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV07G004960 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV09G002690 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV10G007240 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV10G012890 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV10G017460 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV10G020530 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV10G022530 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV11G001110 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV11G005360 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV11G012660 | Rosmarinic Acid | 4CL | medium | pass |
| heliophila_variabilis_HV11G013660 | Rosmarinic Acid | 4CL | low | borderline |
| heliophila_variabilis_HV01G001260 | Rosmarinic Acid | C4H | low | borderline |
| heliophila_variabilis_HV01G003240 | Rosmarinic Acid | C4H | low | borderline |
| heliophila_variabilis_HV01G006790 | Rosmarinic Acid | C4H | low | borderline |
| heliophila_variabilis_HV01G010910 | Rosmarinic Acid | C4H | low | borderline |
| heliophila_variabilis_HV01G010920 | Rosmarinic Acid | C4H | low | borderline |
| heliophila_variabilis_HV01G011000 | Rosmarinic Acid | C4H | low | borderline |
| heliophila_variabilis_HV01G016280 | Rosmarinic Acid | C4H | low | borderline |