Hordeum vulgare (hordeum_vulgare)
Imported from atlas release summary for Hordeum vulgare.
11513
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
11513
Candidate Genes
BAHD
7.29%
C4H
5.42%
C3'H/CYP98A
5.15%
4CL
5.07%
POD
4.76%
NMT
3.69%
STR
3.15%
CYP76
3.04%
Other Families
62.43%
More Families (98)
IFS
749
2.87%
UGT
749
2.87%
T3O
726
2.78%
DWF4/CYP90B1
674
2.58%
7DLGT
619
2.37%
F3H
609
2.33%
F3'H/CYP75B
583
2.23%
SMT1/SMT2/SMT3
562
2.15%
UFGT
555
2.13%
CAS
522
2.0%
SGD
511
1.96%
CAD
404
1.55%
BR6OX2/CYP85A2
384
1.47%
TPS
373
1.43%
GES
354
1.36%
CYP71
350
1.34%
CCR
313
1.2%
H6H
299
1.15%
CODM/T6ODM
295
1.13%
TRI/TRII
271
1.04%
LAC
261
1.0%
G8O/G8H
256
0.98%
ANR
250
0.96%
SLS
241
0.92%
IFR
240
0.92%
CSE
214
0.82%
DFR
204
0.78%
PAL
195
0.75%
F3'5'H/CYP75A
187
0.72%
RAS
185
0.71%
T16H
184
0.71%
PYKS
183
0.7%
8HGO
171
0.66%
GS
170
0.65%
COR
164
0.63%
FNS
162
0.62%
IO
152
0.58%
NCS
147
0.56%
CYP90D1
142
0.54%
COMT
140
0.54%
CPD/CYP90A1
136
0.52%
CNMT
129
0.49%
PMT
125
0.48%
7DLH
118
0.45%
HCT
99
0.38%
AACT
87
0.33%
16OMT
85
0.33%
CHS
85
0.33%
TAT
79
0.3%
F5H/CYP84A
78
0.3%
TYDC_DDC
76
0.29%
BR6OX1/CYP85A1
76
0.29%
CYP51G1
75
0.29%
FPPS
68
0.26%
CPR
67
0.26%
ADC
65
0.25%
MPO
61
0.23%
BBE
58
0.22%
MVD
55
0.21%
ANS/LDOX
54
0.21%
HPPR
53
0.2%
CCoAOMT
51
0.2%
SQS/FDFT1
51
0.2%
XMT_MXMT_DXMT
44
0.17%
6OMT_4OMT_SOMT
43
0.16%
CYP719
40
0.15%
SMO1/SMO2
40
0.15%
ROT3/CYP90C1
37
0.14%
HMGS
37
0.14%
TDC
32
0.12%
CYP80B1
31
0.12%
LAMT
29
0.11%
FK
29
0.11%
GGPPS
28
0.11%
DXS
25
0.1%
HMGR
24
0.09%
MCT/IspD
22
0.08%
DWF1
21
0.08%
ISY
18
0.07%
DWF5
18
0.07%
HYD1
16
0.06%
SQE
16
0.06%
CPI1
16
0.06%
IDI
16
0.06%
MVK
16
0.06%
DET2
15
0.06%
FLS
13
0.05%
DXR
12
0.05%
HDR/IspH
12
0.05%
CHI
9
0.03%
PMK
9
0.03%
CMK/IspE
8
0.03%
HDS/IspG
8
0.03%
CYP80F1
7
0.03%
ODC
5
0.02%
GPPS
5
0.02%
DWF7
3
0.01%
MDS/IspF
3
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 3188 | 21 | BAHD (1526) | View species results |
| Alkaloid pathway | 2896 | 29 | NMT (510) | View species results |
| Phenylpropanoid pathway | 2306 | 12 | POD (1151) | View species results |
| Flavonoid pathway | 1184 | 16 | UFGT (507) | View species results |
| Steroid pathway | 1071 | 15 | CAS (464) | View species results |
| Rosmarinic acid pathway | 868 | 7 | C4H (342) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 8776 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 2186 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Hvulchr1HG0000720.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Hvulchr1HG0003690.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Hvulchr1HG0003700.5 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Hvulchr1HG0003830.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0003830.2 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Hvulchr1HG0003830.3 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0003830.4 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Hvulchr1HG0003860.3 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Hvulchr1HG0003870.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Hvulchr1HG0003870.2 | Terpenoid | CYP76 | medium | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Hvulchr1HG0003870.3 | Terpenoid | CYP76 | medium | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Hvulchr1HG0003930.1 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0003930.2 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Hvulchr1HG0003930.3 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0003930.4 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0003930.5 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0003930.6 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0003930.7 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0003930.8 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0003930.9 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0004480.1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0004480.2 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Hvulchr1HG0004480.3 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0010430.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0010430.2 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0010430.3 | Terpenoid | CYP76 | medium | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Hvulchr1HG0010430.4 | Terpenoid | CYP76 | medium | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Hvulchr1HG0010430.5 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Hvulchr1HG0015540.1 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0015540.2 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0015540.3 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0015540.4 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Hvulchr1HG0019830.2 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Hvulchr1HG0019880.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0019880.2 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0020500.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| Hvulchr1HG0020500.10 | Terpenoid | CYP76 | low | borderline | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| Hvulchr1HG0020500.2 | Terpenoid | CYP76 | medium | pass | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| Hvulchr1HG0020500.3 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0020500.6 | Terpenoid | CYP76 | medium | borderline | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| Hvulchr1HG0020500.7 | Terpenoid | CYP76 | medium | pass | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| Hvulchr1HG0020500.8 | Terpenoid | CYP76 | low | borderline | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| Hvulchr1HG0020500.9 | Terpenoid | CYP76 | low | borderline | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| Hvulchr1HG0020520.1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Hvulchr1HG0020520.2 | Terpenoid | CYP76 | low | borderline | CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ |
| Hvulchr1HG0020560.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0020560.2 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0020560.3 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Hvulchr1HG0021490.1 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Hvulchr1HG0021490.2 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |