PlantSME Plant secondary metabolism enzyme database

Hordeum vulgare (hordeum_vulgare)

Imported from atlas release summary for Hordeum vulgare.

11513
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
IFS 749 2.87% UGT 749 2.87% T3O 726 2.78% DWF4/CYP90B1 674 2.58% 7DLGT 619 2.37% F3H 609 2.33% F3'H/CYP75B 583 2.23% SMT1/SMT2/SMT3 562 2.15% UFGT 555 2.13% CAS 522 2.0% SGD 511 1.96% CAD 404 1.55% BR6OX2/CYP85A2 384 1.47% TPS 373 1.43% GES 354 1.36% CYP71 350 1.34% CCR 313 1.2% H6H 299 1.15% CODM/T6ODM 295 1.13% TRI/TRII 271 1.04% LAC 261 1.0% G8O/G8H 256 0.98% ANR 250 0.96% SLS 241 0.92% IFR 240 0.92% CSE 214 0.82% DFR 204 0.78% PAL 195 0.75% F3'5'H/CYP75A 187 0.72% RAS 185 0.71% T16H 184 0.71% PYKS 183 0.7% 8HGO 171 0.66% GS 170 0.65% COR 164 0.63% FNS 162 0.62% IO 152 0.58% NCS 147 0.56% CYP90D1 142 0.54% COMT 140 0.54% CPD/CYP90A1 136 0.52% CNMT 129 0.49% PMT 125 0.48% 7DLH 118 0.45% HCT 99 0.38% AACT 87 0.33% 16OMT 85 0.33% CHS 85 0.33% TAT 79 0.3% F5H/CYP84A 78 0.3% TYDC_DDC 76 0.29% BR6OX1/CYP85A1 76 0.29% CYP51G1 75 0.29% FPPS 68 0.26% CPR 67 0.26% ADC 65 0.25% MPO 61 0.23% BBE 58 0.22% MVD 55 0.21% ANS/LDOX 54 0.21% HPPR 53 0.2% CCoAOMT 51 0.2% SQS/FDFT1 51 0.2% XMT_MXMT_DXMT 44 0.17% 6OMT_4OMT_SOMT 43 0.16% CYP719 40 0.15% SMO1/SMO2 40 0.15% ROT3/CYP90C1 37 0.14% HMGS 37 0.14% TDC 32 0.12% CYP80B1 31 0.12% LAMT 29 0.11% FK 29 0.11% GGPPS 28 0.11% DXS 25 0.1% HMGR 24 0.09% MCT/IspD 22 0.08% DWF1 21 0.08% ISY 18 0.07% DWF5 18 0.07% HYD1 16 0.06% SQE 16 0.06% CPI1 16 0.06% IDI 16 0.06% MVK 16 0.06% DET2 15 0.06% FLS 13 0.05% DXR 12 0.05% HDR/IspH 12 0.05% CHI 9 0.03% PMK 9 0.03% CMK/IspE 8 0.03% HDS/IspG 8 0.03% CYP80F1 7 0.03% ODC 5 0.02% GPPS 5 0.02% DWF7 3 0.01% MDS/IspF 3 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 3188 21 BAHD (1526) View species results
Alkaloid pathway 2896 29 NMT (510) View species results
Phenylpropanoid pathway 2306 12 POD (1151) View species results
Flavonoid pathway 1184 16 UFGT (507) View species results
Steroid pathway 1071 15 CAS (464) View species results
Rosmarinic acid pathway 868 7 C4H (342) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 8776 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 2186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status Best Target
Hvulchr1HG0007890.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.10 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.11 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Hvulchr1HG0007890.12 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.13 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.14 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Hvulchr1HG0007890.17 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.18 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.2 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.3 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.4 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Hvulchr1HG0007890.5 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Hvulchr1HG0007890.6 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0007890.7 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.10 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.11 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.12 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.13 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.14 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.15 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.16 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.17 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.18 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.19 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.2 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.20 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.21 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.22 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.3 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.4 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.5 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.6 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.7 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.8 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr1HG0022610.9 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Hvulchr2HG0015330.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Hvulchr2HG0015330.2 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Hvulchr2HG0031610.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Hvulchr2HG0031610.2 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Hvulchr2HG0031680.1 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Hvulchr2HG0031680.2 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Hvulchr2HG0031680.3 Rosmarinic Acid 4CL medium pass 4CL__00006__sp_P17814_4CL1_ORYSJ
Hvulchr2HG0033960.1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Hvulchr2HG0033960.11 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Hvulchr2HG0033960.12 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Hvulchr2HG0033960.13 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Hvulchr2HG0033960.14 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Hvulchr2HG0033960.6 Rosmarinic Acid 4CL low borderline 4CL__00008__sp_Q42982_4CL2_ORYSJ
Hvulchr2HG0033960.7 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Hvulchr2HG0033960.8 Rosmarinic Acid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH