PlantSME Plant secondary metabolism enzyme database

Hordeum vulgare (hordeum_vulgare)

Imported from atlas release summary for Hordeum vulgare.

11513
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
IFS 749 2.87% UGT 749 2.87% T3O 726 2.78% DWF4/CYP90B1 674 2.58% 7DLGT 619 2.37% F3H 609 2.33% F3'H/CYP75B 583 2.23% SMT1/SMT2/SMT3 562 2.15% UFGT 555 2.13% CAS 522 2.0% SGD 511 1.96% CAD 404 1.55% BR6OX2/CYP85A2 384 1.47% TPS 373 1.43% GES 354 1.36% CYP71 350 1.34% CCR 313 1.2% H6H 299 1.15% CODM/T6ODM 295 1.13% TRI/TRII 271 1.04% LAC 261 1.0% G8O/G8H 256 0.98% ANR 250 0.96% SLS 241 0.92% IFR 240 0.92% CSE 214 0.82% DFR 204 0.78% PAL 195 0.75% F3'5'H/CYP75A 187 0.72% RAS 185 0.71% T16H 184 0.71% PYKS 183 0.7% 8HGO 171 0.66% GS 170 0.65% COR 164 0.63% FNS 162 0.62% IO 152 0.58% NCS 147 0.56% CYP90D1 142 0.54% COMT 140 0.54% CPD/CYP90A1 136 0.52% CNMT 129 0.49% PMT 125 0.48% 7DLH 118 0.45% HCT 99 0.38% AACT 87 0.33% 16OMT 85 0.33% CHS 85 0.33% TAT 79 0.3% F5H/CYP84A 78 0.3% TYDC_DDC 76 0.29% BR6OX1/CYP85A1 76 0.29% CYP51G1 75 0.29% FPPS 68 0.26% CPR 67 0.26% ADC 65 0.25% MPO 61 0.23% BBE 58 0.22% MVD 55 0.21% ANS/LDOX 54 0.21% HPPR 53 0.2% CCoAOMT 51 0.2% SQS/FDFT1 51 0.2% XMT_MXMT_DXMT 44 0.17% 6OMT_4OMT_SOMT 43 0.16% CYP719 40 0.15% SMO1/SMO2 40 0.15% ROT3/CYP90C1 37 0.14% HMGS 37 0.14% TDC 32 0.12% CYP80B1 31 0.12% LAMT 29 0.11% FK 29 0.11% GGPPS 28 0.11% DXS 25 0.1% HMGR 24 0.09% MCT/IspD 22 0.08% DWF1 21 0.08% ISY 18 0.07% DWF5 18 0.07% HYD1 16 0.06% SQE 16 0.06% CPI1 16 0.06% IDI 16 0.06% MVK 16 0.06% DET2 15 0.06% FLS 13 0.05% DXR 12 0.05% HDR/IspH 12 0.05% CHI 9 0.03% PMK 9 0.03% CMK/IspE 8 0.03% HDS/IspG 8 0.03% CYP80F1 7 0.03% ODC 5 0.02% GPPS 5 0.02% DWF7 3 0.01% MDS/IspF 3 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 3188 21 BAHD (1526) View species results
Alkaloid pathway 2896 29 NMT (510) View species results
Phenylpropanoid pathway 2306 12 POD (1151) View species results
Flavonoid pathway 1184 16 UFGT (507) View species results
Steroid pathway 1071 15 CAS (464) View species results
Rosmarinic acid pathway 868 7 C4H (342) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 8776 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 2186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Hvulchr1HG0007340.5 Flavonoid F3H medium borderline
Hvulchr1HG0007340.7 Flavonoid F3H medium borderline
Hvulchr1HG0009080.1 Flavonoid F3H medium borderline
Hvulchr1HG0009080.2 Flavonoid F3H medium borderline
Hvulchr1HG0009080.5 Flavonoid F3H medium borderline
Hvulchr1HG0009870.1 Flavonoid F3H medium borderline
Hvulchr1HG0009870.2 Flavonoid F3H medium borderline
Hvulchr1HG0009870.3 Flavonoid F3H medium borderline
Hvulchr1HG0009890.1 Flavonoid F3H medium borderline
Hvulchr1HG0009900.1 Flavonoid F3H medium borderline
Hvulchr1HG0009900.2 Flavonoid F3H medium borderline
Hvulchr1HG0011370.1 Flavonoid F3H low borderline
Hvulchr1HG0011370.3 Flavonoid F3H medium pass
Hvulchr1HG0011370.4 Flavonoid F3H medium pass
Hvulchr1HG0011370.6 Flavonoid F3H low borderline
Hvulchr1HG0011370.7 Flavonoid F3H medium pass
Hvulchr1HG0011370.8 Flavonoid F3H low borderline
Hvulchr1HG0013960.2 Flavonoid F3H medium borderline
Hvulchr1HG0013960.3 Flavonoid F3H low borderline
Hvulchr1HG0013960.4 Flavonoid F3H medium borderline
Hvulchr1HG0013960.5 Flavonoid F3H medium borderline
Hvulchr1HG0013960.6 Flavonoid F3H medium borderline
Hvulchr1HG0013960.7 Flavonoid F3H medium pass
Hvulchr1HG0013960.8 Flavonoid F3H low borderline
Hvulchr1HG0017900.1 Flavonoid F3H low borderline
Hvulchr1HG0021350.1 Flavonoid F3H low borderline
Hvulchr1HG0021350.2 Flavonoid F3H low borderline
Hvulchr1HG0021350.3 Flavonoid F3H low borderline
Hvulchr1HG0021350.4 Flavonoid F3H low borderline
Hvulchr1HG0021350.5 Flavonoid F3H low borderline
Hvulchr1HG0025250.1 Flavonoid F3H medium borderline
Hvulchr1HG0025250.2 Flavonoid F3H medium borderline
Hvulchr1HG0025250.4 Flavonoid F3H medium borderline
Hvulchr1HG0025250.5 Flavonoid F3H medium borderline
Hvulchr1HG0025250.6 Flavonoid F3H medium borderline
Hvulchr1HG0029190.1 Flavonoid F3H medium borderline
Hvulchr1HG0029190.2 Flavonoid F3H medium borderline
Hvulchr1HG0029190.3 Flavonoid F3H medium borderline
Hvulchr1HG0029190.4 Flavonoid F3H medium borderline
Hvulchr1HG0029190.5 Flavonoid F3H medium borderline
Hvulchr1HG0029190.6 Flavonoid F3H medium borderline
Hvulchr1HG0029190.7 Flavonoid F3H low borderline
Hvulchr1HG0030550.1 Flavonoid F3H medium borderline
Hvulchr1HG0032950.1 Flavonoid F3H low borderline
Hvulchr1HG0032950.2 Flavonoid F3H medium pass
Hvulchr1HG0032950.3 Flavonoid F3H low borderline
Hvulchr1HG0032950.4 Flavonoid F3H medium pass
Hvulchr1HG0032950.5 Flavonoid F3H medium pass
Hvulchr1HG0032950.6 Flavonoid F3H low borderline
Hvulchr1HG0033100.1 Flavonoid F3H medium borderline