Hordeum vulgare (hordeum_vulgare)
Imported from atlas release summary for Hordeum vulgare.
14151
Candidate Protein Records
11513
Pathway-Level Records
26091
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
26091
Family-Level Calls
BAHD
7.29%
C4H
5.42%
C3'H/CYP98A
5.15%
4CL
5.07%
POD
4.76%
NMT
3.69%
STR
3.15%
CYP76
3.04%
Other Families
62.43%
More Families (98)
IFS
749
2.87%
UGT
749
2.87%
T3O
726
2.78%
DWF4/CYP90B1
674
2.58%
7DLGT
619
2.37%
F3H
609
2.33%
F3'H/CYP75B
583
2.23%
SMT1/SMT2/SMT3
562
2.15%
UFGT
555
2.13%
CAS
522
2.0%
SGD
511
1.96%
CAD
404
1.55%
BR6OX2/CYP85A2
384
1.47%
TPS
373
1.43%
GES
354
1.36%
CYP71
350
1.34%
CCR
313
1.2%
H6H
299
1.15%
CODM/T6ODM
295
1.13%
TRI/TRII
271
1.04%
LAC
261
1.0%
G8O/G8H
256
0.98%
ANR
250
0.96%
SLS
241
0.92%
IFR
240
0.92%
CSE
214
0.82%
DFR
204
0.78%
PAL
195
0.75%
F3'5'H/CYP75A
187
0.72%
RAS
185
0.71%
T16H
184
0.71%
PYKS
183
0.7%
8HGO
171
0.66%
GS
170
0.65%
COR
164
0.63%
FNS
162
0.62%
IO
152
0.58%
NCS
147
0.56%
CYP90D1
142
0.54%
COMT
140
0.54%
CPD/CYP90A1
136
0.52%
CNMT
129
0.49%
PMT
125
0.48%
7DLH
118
0.45%
HCT
99
0.38%
AACT
87
0.33%
16OMT
85
0.33%
CHS
85
0.33%
TAT
79
0.3%
F5H/CYP84A
78
0.3%
TYDC_DDC
76
0.29%
BR6OX1/CYP85A1
76
0.29%
CYP51G1
75
0.29%
FPPS
68
0.26%
CPR
67
0.26%
ADC
65
0.25%
MPO
61
0.23%
BBE
58
0.22%
MVD
55
0.21%
ANS/LDOX
54
0.21%
HPPR
53
0.2%
CCoAOMT
51
0.2%
SQS/FDFT1
51
0.2%
XMT_MXMT_DXMT
44
0.17%
6OMT_4OMT_SOMT
43
0.16%
CYP719
40
0.15%
SMO1/SMO2
40
0.15%
ROT3/CYP90C1
37
0.14%
HMGS
37
0.14%
TDC
32
0.12%
CYP80B1
31
0.12%
LAMT
29
0.11%
FK
29
0.11%
GGPPS
28
0.11%
DXS
25
0.1%
HMGR
24
0.09%
MCT/IspD
22
0.08%
DWF1
21
0.08%
ISY
18
0.07%
DWF5
18
0.07%
HYD1
16
0.06%
SQE
16
0.06%
CPI1
16
0.06%
IDI
16
0.06%
MVK
16
0.06%
DET2
15
0.06%
FLS
13
0.05%
DXR
12
0.05%
HDR/IspH
12
0.05%
CHI
9
0.03%
PMK
9
0.03%
CMK/IspE
8
0.03%
HDS/IspG
8
0.03%
CYP80F1
7
0.03%
ODC
5
0.02%
GPPS
5
0.02%
DWF7
3
0.01%
MDS/IspF
3
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 3188 | 21 | BAHD (1526) | View species results |
| Alkaloid pathway | 2896 | 29 | NMT (510) | View species results |
| Phenylpropanoid pathway | 2306 | 12 | POD (1151) | View species results |
| Flavonoid pathway | 1184 | 16 | UFGT (507) | View species results |
| Steroid pathway | 1071 | 15 | CAS (464) | View species results |
| Rosmarinic acid pathway | 868 | 7 | C4H (342) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 8776 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 2186 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Hvulchr3HG0011950.15 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0011950.19 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0011950.2 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0011950.8 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0012890.8 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0014150.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0014150.2 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0015030.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0015440.1 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0015480.1 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0015480.3 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0015480.4 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0016960.1 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0016960.2 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0025680.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.10 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.11 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.12 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.2 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.3 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.4 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.5 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.6 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.7 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.8 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025680.9 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025690.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025690.2 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025690.3 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025690.4 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025690.5 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025690.6 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025690.7 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025700.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025700.2 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025700.3 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025700.4 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025700.5 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0025700.6 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0037450.1 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0037450.5 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0037500.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0037500.2 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0037520.2 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0040790.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0040870.1 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0040870.2 | Flavonoid | IFS | medium | borderline |
| Hvulchr3HG0041080.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0050990.1 | Flavonoid | IFS | low | borderline |
| Hvulchr3HG0050990.2 | Flavonoid | IFS | low | borderline |