PlantSME Plant secondary metabolism enzyme database

Hypopterygium japonicum (hypopterygium_japonicum)

Imported from atlas release summary for Hypopterygium japonicum.

734
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 24.66% Terpenoid pathway 24.52% Alkaloid pathway 22.34% Flavonoid pathway 13.9% Rosmarinic acid pathway 9.26% Steroid pathway 5.31%
Family Distribution
BAHD 6.5% POD 6.15% 4CL 5.64% C4H 5.24% C3'H/CYP98A 4.62% NMT 4.05% CYP76 3.65% STR 2.91%
Other Families 61.25%
More Families (95)
IFR 51 2.91% UGT 51 2.91% 7DLGT 48 2.74% PAL 48 2.74% UFGT 46 2.62% IFS 44 2.51% BR6OX2/CYP85A2 39 2.22% PYKS 37 2.11% GS 34 1.94% F3'H/CYP75B 32 1.82% SMT1/SMT2/SMT3 32 1.82% F3H 28 1.6% T3O 26 1.48% DWF4/CYP90B1 23 1.31% CODM/T6ODM 18 1.03% CHS 18 1.03% CYP90D1 18 1.03% H6H 17 0.97% CAD 17 0.97% T16H 15 0.85% LAMT 14 0.8% SLS 14 0.8% TRI/TRII 14 0.8% G8O/G8H 14 0.8% CAS 14 0.8% CYP71 14 0.8% F3'5'H/CYP75A 13 0.74% BBE 12 0.68% IO 12 0.68% NCS 12 0.68% HCT 12 0.68% ANR 11 0.63% CSE 11 0.63% TAT 11 0.63% SGD 10 0.57% CYP80B1 10 0.57% CNMT 10 0.57% COMT 10 0.57% 7DLH 9 0.51% CCR 9 0.51% LAC 9 0.51% HDR/IspH 9 0.51% COR 8 0.46% GGPPS 8 0.46% 8HGO 7 0.4% FNS 7 0.4% SQS/FDFT1 7 0.4% CPD/CYP90A1 7 0.4% 16OMT 6 0.34% CPR 6 0.34% MVK 6 0.34% MVD 6 0.34% AACT 6 0.34% TDC 5 0.28% PMT 5 0.28% ISY 5 0.28% MPO 5 0.28% FLS 5 0.28% RAS 5 0.28% TYDC_DDC 4 0.23% ANS/LDOX 4 0.23% DFR 4 0.23% F5H/CYP84A 4 0.23% BR6OX1/CYP85A1 4 0.23% DET2 4 0.23% HPPR 3 0.17% DWF5 3 0.17% SMO1/SMO2 3 0.17% MCT/IspD 3 0.17% ADC 2 0.11% CYP719 2 0.11% CHI 2 0.11% CCoAOMT 2 0.11% FK 2 0.11% ROT3/CYP90C1 2 0.11% CPI1 2 0.11% SQE 2 0.11% HMGR 2 0.11% DXR 2 0.11% HMGS 2 0.11% MDS/IspF 2 0.11% FPPS 2 0.11% XMT_MXMT_DXMT 1 0.06% GES 1 0.06% 6OMT_4OMT_SOMT 1 0.06% DWF7 1 0.06% DWF1 1 0.06% CYP51G1 1 0.06% HYD1 1 0.06% HDS/IspG 1 0.06% CMK/IspE 1 0.06% IDI 1 0.06% DXS 1 0.06% TPS 1 0.06% PMK 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 181 10 POD (102) View species results
Terpenoid pathway 180 19 BAHD (69) View species results
Alkaloid pathway 164 17 NMT (38) View species results
Flavonoid pathway 102 8 UFGT (42) View species results
Rosmarinic acid pathway 68 7 C4H (21) View species results
Steroid pathway 39 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 540 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
Hjapcontig_10440011760 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_10440011770 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_10490015820 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_10570019680 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_1310052630 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Hjapcontig_3740143720 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Hjapcontig_3970151840 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_4910180870 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
Hjapcontig_5560205890 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_5660206110 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_7700267680 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_8170289020 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_8170289040 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Hjapcontig_8240299920 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL