Hypopterygium japonicum (hypopterygium_japonicum)
Imported from atlas release summary for Hypopterygium japonicum.
734
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
734
Candidate Genes
BAHD
6.5%
POD
6.15%
4CL
5.64%
C4H
5.24%
C3'H/CYP98A
4.62%
NMT
4.05%
CYP76
3.65%
STR
2.91%
Other Families
61.25%
More Families (95)
IFR
51
2.91%
UGT
51
2.91%
7DLGT
48
2.74%
PAL
48
2.74%
UFGT
46
2.62%
IFS
44
2.51%
BR6OX2/CYP85A2
39
2.22%
PYKS
37
2.11%
GS
34
1.94%
F3'H/CYP75B
32
1.82%
SMT1/SMT2/SMT3
32
1.82%
F3H
28
1.6%
T3O
26
1.48%
DWF4/CYP90B1
23
1.31%
CODM/T6ODM
18
1.03%
CHS
18
1.03%
CYP90D1
18
1.03%
H6H
17
0.97%
CAD
17
0.97%
T16H
15
0.85%
LAMT
14
0.8%
SLS
14
0.8%
TRI/TRII
14
0.8%
G8O/G8H
14
0.8%
CAS
14
0.8%
CYP71
14
0.8%
F3'5'H/CYP75A
13
0.74%
BBE
12
0.68%
IO
12
0.68%
NCS
12
0.68%
HCT
12
0.68%
ANR
11
0.63%
CSE
11
0.63%
TAT
11
0.63%
SGD
10
0.57%
CYP80B1
10
0.57%
CNMT
10
0.57%
COMT
10
0.57%
7DLH
9
0.51%
CCR
9
0.51%
LAC
9
0.51%
HDR/IspH
9
0.51%
COR
8
0.46%
GGPPS
8
0.46%
8HGO
7
0.4%
FNS
7
0.4%
SQS/FDFT1
7
0.4%
CPD/CYP90A1
7
0.4%
16OMT
6
0.34%
CPR
6
0.34%
MVK
6
0.34%
MVD
6
0.34%
AACT
6
0.34%
TDC
5
0.28%
PMT
5
0.28%
ISY
5
0.28%
MPO
5
0.28%
FLS
5
0.28%
RAS
5
0.28%
TYDC_DDC
4
0.23%
ANS/LDOX
4
0.23%
DFR
4
0.23%
F5H/CYP84A
4
0.23%
BR6OX1/CYP85A1
4
0.23%
DET2
4
0.23%
HPPR
3
0.17%
DWF5
3
0.17%
SMO1/SMO2
3
0.17%
MCT/IspD
3
0.17%
ADC
2
0.11%
CYP719
2
0.11%
CHI
2
0.11%
CCoAOMT
2
0.11%
FK
2
0.11%
ROT3/CYP90C1
2
0.11%
CPI1
2
0.11%
SQE
2
0.11%
HMGR
2
0.11%
DXR
2
0.11%
HMGS
2
0.11%
MDS/IspF
2
0.11%
FPPS
2
0.11%
XMT_MXMT_DXMT
1
0.06%
GES
1
0.06%
6OMT_4OMT_SOMT
1
0.06%
DWF7
1
0.06%
DWF1
1
0.06%
CYP51G1
1
0.06%
HYD1
1
0.06%
HDS/IspG
1
0.06%
CMK/IspE
1
0.06%
IDI
1
0.06%
DXS
1
0.06%
TPS
1
0.06%
PMK
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 181 | 10 | POD (102) | View species results |
| Terpenoid pathway | 180 | 19 | BAHD (69) | View species results |
| Alkaloid pathway | 164 | 17 | NMT (38) | View species results |
| Flavonoid pathway | 102 | 8 | UFGT (42) | View species results |
| Rosmarinic acid pathway | 68 | 7 | C4H (21) | View species results |
| Steroid pathway | 39 | 12 | CAS (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 540 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 131 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Hjapcontig_10720023830 | Alkaloid | PYKS | high | pass |
| Hjapcontig_1300051400 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_1370058790 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_1370058810 | Alkaloid | PYKS | medium | pass |
| Hjapcontig_1380058830 | Alkaloid | PYKS | high | pass |
| Hjapcontig_1380058860 | Alkaloid | PYKS | high | pass |
| Hjapcontig_1480066300 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_1810070250 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_1900072680 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_1950074150 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_2280088800 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_2290089210 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_2560106280 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_2630113240 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_3350126460 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_3350126500 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_3500131730 | Alkaloid | PYKS | medium | pass |
| Hjapcontig_3500131750 | Alkaloid | PYKS | high | pass |
| Hjapcontig_4100160060 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_5130187480 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_5480201140 | Alkaloid | PYKS | high | pass |
| Hjapcontig_6290216540 | Alkaloid | PYKS | high | pass |
| Hjapcontig_6290216550 | Alkaloid | PYKS | high | pass |
| Hjapcontig_6290216560 | Alkaloid | PYKS | high | pass |
| Hjapcontig_6590228150 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_6590228180 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_7450259210 | Alkaloid | PYKS | high | pass |
| Hjapcontig_7450259230 | Alkaloid | PYKS | high | pass |
| Hjapcontig_7760270080 | Alkaloid | PYKS | high | pass |
| Hjapcontig_7870274750 | Alkaloid | PYKS | high | pass |
| Hjapcontig_7870274780 | Alkaloid | PYKS | medium | pass |
| Hjapcontig_7870274810 | Alkaloid | PYKS | high | pass |
| Hjapcontig_8190291200 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_8230297600 | Alkaloid | PYKS | high | pass |
| Hjapcontig_8230298120 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_9350336160 | Alkaloid | PYKS | low | borderline |
| Hjapcontig_9580339760 | Alkaloid | PYKS | low | borderline |