PlantSME Plant secondary metabolism enzyme database

Hypopterygium japonicum (hypopterygium_japonicum)

Imported from atlas release summary for Hypopterygium japonicum.

734
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 24.66% Terpenoid pathway 24.52% Alkaloid pathway 22.34% Flavonoid pathway 13.9% Rosmarinic acid pathway 9.26% Steroid pathway 5.31%
Family Distribution
BAHD 6.5% POD 6.15% 4CL 5.64% C4H 5.24% C3'H/CYP98A 4.62% NMT 4.05% CYP76 3.65% STR 2.91%
Other Families 61.25%
More Families (95)
IFR 51 2.91% UGT 51 2.91% 7DLGT 48 2.74% PAL 48 2.74% UFGT 46 2.62% IFS 44 2.51% BR6OX2/CYP85A2 39 2.22% PYKS 37 2.11% GS 34 1.94% F3'H/CYP75B 32 1.82% SMT1/SMT2/SMT3 32 1.82% F3H 28 1.6% T3O 26 1.48% DWF4/CYP90B1 23 1.31% CODM/T6ODM 18 1.03% CHS 18 1.03% CYP90D1 18 1.03% H6H 17 0.97% CAD 17 0.97% T16H 15 0.85% LAMT 14 0.8% SLS 14 0.8% TRI/TRII 14 0.8% G8O/G8H 14 0.8% CAS 14 0.8% CYP71 14 0.8% F3'5'H/CYP75A 13 0.74% BBE 12 0.68% IO 12 0.68% NCS 12 0.68% HCT 12 0.68% ANR 11 0.63% CSE 11 0.63% TAT 11 0.63% SGD 10 0.57% CYP80B1 10 0.57% CNMT 10 0.57% COMT 10 0.57% 7DLH 9 0.51% CCR 9 0.51% LAC 9 0.51% HDR/IspH 9 0.51% COR 8 0.46% GGPPS 8 0.46% 8HGO 7 0.4% FNS 7 0.4% SQS/FDFT1 7 0.4% CPD/CYP90A1 7 0.4% 16OMT 6 0.34% CPR 6 0.34% MVK 6 0.34% MVD 6 0.34% AACT 6 0.34% TDC 5 0.28% PMT 5 0.28% ISY 5 0.28% MPO 5 0.28% FLS 5 0.28% RAS 5 0.28% TYDC_DDC 4 0.23% ANS/LDOX 4 0.23% DFR 4 0.23% F5H/CYP84A 4 0.23% BR6OX1/CYP85A1 4 0.23% DET2 4 0.23% HPPR 3 0.17% DWF5 3 0.17% SMO1/SMO2 3 0.17% MCT/IspD 3 0.17% ADC 2 0.11% CYP719 2 0.11% CHI 2 0.11% CCoAOMT 2 0.11% FK 2 0.11% ROT3/CYP90C1 2 0.11% CPI1 2 0.11% SQE 2 0.11% HMGR 2 0.11% DXR 2 0.11% HMGS 2 0.11% MDS/IspF 2 0.11% FPPS 2 0.11% XMT_MXMT_DXMT 1 0.06% GES 1 0.06% 6OMT_4OMT_SOMT 1 0.06% DWF7 1 0.06% DWF1 1 0.06% CYP51G1 1 0.06% HYD1 1 0.06% HDS/IspG 1 0.06% CMK/IspE 1 0.06% IDI 1 0.06% DXS 1 0.06% TPS 1 0.06% PMK 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 181 10 POD (102) View species results
Terpenoid pathway 180 19 BAHD (69) View species results
Alkaloid pathway 164 17 NMT (38) View species results
Flavonoid pathway 102 8 UFGT (42) View species results
Rosmarinic acid pathway 68 7 C4H (21) View species results
Steroid pathway 39 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 540 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
Hjapcontig_10100003130 Alkaloid LAMT low borderline
Hjapcontig_10490015640 Alkaloid LAMT low borderline
Hjapcontig_1340054870 Alkaloid LAMT medium borderline
Hjapcontig_1340054890 Alkaloid LAMT medium borderline
Hjapcontig_1340054950 Alkaloid LAMT medium pass
Hjapcontig_1340055120 Alkaloid LAMT medium borderline
Hjapcontig_2090080860 Alkaloid LAMT low borderline
Hjapcontig_3640140040 Alkaloid LAMT low borderline
Hjapcontig_4150164920 Alkaloid LAMT medium pass
Hjapcontig_6600228810 Alkaloid LAMT low borderline
Hjapcontig_6930245870 Alkaloid LAMT medium pass
Hjapcontig_8880313420 Alkaloid LAMT medium borderline
Hjapcontig_8880313430 Alkaloid LAMT medium borderline
Hjapcontig_9290331890 Alkaloid LAMT medium borderline