PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
Jreg01G0003740.1 Alkaloid 7DLGT low borderline
Jreg01G0011910.1 Alkaloid 7DLGT medium pass
Jreg01G0011920.1 Alkaloid 7DLGT medium pass
Jreg01G0011930.1 Alkaloid 7DLGT medium pass
Jreg01G0011940.1 Alkaloid 7DLGT medium pass
Jreg01G0011950.1 Alkaloid 7DLGT medium pass
Jreg01G0011960.1 Alkaloid 7DLGT medium pass
Jreg01G0011960.2 Alkaloid 7DLGT medium pass
Jreg01G0011970.1 Alkaloid 7DLGT medium pass
Jreg01G0011980.1 Alkaloid 7DLGT medium pass
Jreg01G0011990.1 Alkaloid 7DLGT medium pass
Jreg01G0012000.1 Alkaloid 7DLGT medium pass
Jreg01G0012010.1 Alkaloid 7DLGT medium pass
Jreg01G0012440.1 Alkaloid 7DLGT low borderline
Jreg01G0012440.2 Alkaloid 7DLGT low borderline
Jreg01G0031050.1 Alkaloid 7DLGT medium pass
Jreg01G0031060.1 Alkaloid 7DLGT medium pass
Jreg02G0012630.1 Alkaloid 7DLGT low borderline
Jreg03G0000370.1 Alkaloid 7DLGT low borderline
Jreg03G0000380.1 Alkaloid 7DLGT low borderline
Jreg03G0000390.1 Alkaloid 7DLGT medium pass
Jreg03G0000410.1 Alkaloid 7DLGT low borderline
Jreg03G0007200.1 Alkaloid 7DLGT low borderline
Jreg03G0007210.1 Alkaloid 7DLGT low borderline
Jreg03G0007220.1 Alkaloid 7DLGT low borderline
Jreg03G0007230.1 Alkaloid 7DLGT low borderline
Jreg03G0007240.1 Alkaloid 7DLGT low borderline
Jreg03G0018780.1 Alkaloid 7DLGT medium pass
Jreg03G0018790.1 Alkaloid 7DLGT low borderline
Jreg03G0018800.1 Alkaloid 7DLGT low borderline
Jreg03G0019250.1 Alkaloid 7DLGT low borderline
Jreg03G0019260.1 Alkaloid 7DLGT low borderline
Jreg04G0002610.1 Alkaloid 7DLGT medium pass
Jreg04G0004480.1 Alkaloid 7DLGT medium pass
Jreg04G0004490.1 Alkaloid 7DLGT medium pass
Jreg04G0004500.1 Alkaloid 7DLGT medium pass
Jreg04G0008010.1 Alkaloid 7DLGT medium pass
Jreg04G0017070.1 Alkaloid 7DLGT low borderline
Jreg05G0003540.1 Alkaloid 7DLGT low borderline
Jreg05G0005060.1 Alkaloid 7DLGT low borderline
Jreg05G0005360.1 Alkaloid 7DLGT medium pass
Jreg05G0005410.1 Alkaloid 7DLGT low borderline
Jreg05G0014320.1 Alkaloid 7DLGT low borderline
Jreg05G0014330.1 Alkaloid 7DLGT low borderline
Jreg05G0014340.1 Alkaloid 7DLGT low borderline
Jreg05G0014350.1 Alkaloid 7DLGT low borderline
Jreg05G0014360.1 Alkaloid 7DLGT low borderline
Jreg06G0006140.1 Alkaloid 7DLGT low borderline
Jreg06G0006150.1 Alkaloid 7DLGT low borderline
Jreg06G0006230.1 Alkaloid 7DLGT low borderline