PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Jreg01G0003900.1 Alkaloid GS low borderline
Jreg01G0003910.1 Alkaloid GS low borderline
Jreg01G0003920.1 Alkaloid GS low borderline
Jreg01G0003930.1 Alkaloid GS low borderline
Jreg01G0011010.1 Alkaloid GS medium pass
Jreg01G0011020.1 Alkaloid GS medium pass
Jreg01G0014180.1 Alkaloid GS high pass
Jreg01G0028580.1 Alkaloid GS medium pass
Jreg02G0013240.1 Alkaloid GS high pass
Jreg02G0013250.1 Alkaloid GS high pass
Jreg02G0013270.1 Alkaloid GS high pass
Jreg02G0013280.1 Alkaloid GS medium pass
Jreg02G0013290.1 Alkaloid GS medium pass
Jreg02G0013290.2 Alkaloid GS medium pass
Jreg02G0013300.1 Alkaloid GS high pass
Jreg02G0013310.1 Alkaloid GS high pass
Jreg02G0019460.1 Alkaloid GS low borderline
Jreg02G0019470.1 Alkaloid GS low borderline
Jreg04G0006000.1 Alkaloid GS low borderline
Jreg05G0004800.1 Alkaloid GS low borderline
Jreg05G0004810.1 Alkaloid GS low borderline
Jreg05G0004820.1 Alkaloid GS low borderline
Jreg05G0004830.1 Alkaloid GS low borderline
Jreg08G0008070.1 Alkaloid GS high pass
Jreg08G0008080.1 Alkaloid GS medium pass
Jreg08G0010010.1 Alkaloid GS high pass
Jreg08G0017110.1 Alkaloid GS high pass
Jreg08G0017120.1 Alkaloid GS high pass
Jreg08G0017130.1 Alkaloid GS medium pass
Jreg08G0017140.1 Alkaloid GS high pass
Jreg08G0017150.1 Alkaloid GS high pass
Jreg08G0017160.1 Alkaloid GS high pass
Jreg08G0017170.1 Alkaloid GS medium pass
Jreg08G0017190.1 Alkaloid GS high pass
Jreg08G0017200.1 Alkaloid GS high pass
Jreg08G0017210.1 Alkaloid GS high pass
Jreg09G0012970.1 Alkaloid GS low borderline
Jreg10G0009450.1 Alkaloid GS high pass
Jreg11G0005460.1 Alkaloid GS high pass
Jreg11G0005470.1 Alkaloid GS high pass
Jreg11G0028450.1 Alkaloid GS low borderline
Jreg11G0028460.1 Alkaloid GS low borderline
Jreg12G0022930.1 Alkaloid GS low borderline
Jreg12G0022940.1 Alkaloid GS low borderline
Jreg13G0001220.1 Alkaloid GS high pass
Jreg14G0005580.1 Alkaloid GS low borderline
Jreg14G0005590.1 Alkaloid GS low borderline
Jreg14G0005610.1 Alkaloid GS low borderline
Jreg14G0011550.1 Alkaloid GS low borderline
Jreg14G0011560.1 Alkaloid GS low borderline