PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Jreg02G0001920.1 Flavonoid C4H medium borderline
Jreg05G0005720.1 Flavonoid C4H medium borderline
Jreg05G0005730.1 Flavonoid C4H medium pass
Jreg05G0005740.1 Flavonoid C4H medium borderline
Jreg14G0004050.1 Flavonoid C4H medium borderline
Jreg14G0006930.1 Flavonoid C4H medium borderline
Jreg15G0005390.1 Flavonoid C4H medium borderline
Jreg01G0005190.1 Rosmarinic Acid C4H low borderline
Jreg01G0006720.1 Rosmarinic Acid C4H low borderline
Jreg01G0014700.1 Rosmarinic Acid C4H low borderline
Jreg01G0014800.1 Rosmarinic Acid C4H medium pass
Jreg01G0014810.1 Rosmarinic Acid C4H medium pass
Jreg01G0014820.1 Rosmarinic Acid C4H medium pass
Jreg01G0014830.1 Rosmarinic Acid C4H medium pass
Jreg01G0014880.1 Rosmarinic Acid C4H medium pass
Jreg01G0014930.1 Rosmarinic Acid C4H low borderline
Jreg01G0014940.1 Rosmarinic Acid C4H medium pass
Jreg01G0014950.1 Rosmarinic Acid C4H medium pass
Jreg01G0014970.1 Rosmarinic Acid C4H low borderline
Jreg01G0014980.1 Rosmarinic Acid C4H low borderline
Jreg01G0015800.1 Rosmarinic Acid C4H medium pass
Jreg01G0023410.1 Rosmarinic Acid C4H medium pass
Jreg01G0023660.1 Rosmarinic Acid C4H low borderline
Jreg01G0026900.1 Rosmarinic Acid C4H medium pass
Jreg01G0027160.1 Rosmarinic Acid C4H low borderline
Jreg01G0031660.1 Rosmarinic Acid C4H medium pass
Jreg01G0031660.2 Rosmarinic Acid C4H low borderline
Jreg02G0001630.1 Rosmarinic Acid C4H low borderline
Jreg02G0001730.1 Rosmarinic Acid C4H low borderline
Jreg02G0001750.1 Rosmarinic Acid C4H low borderline
Jreg02G0001770.1 Rosmarinic Acid C4H low borderline
Jreg02G0001790.1 Rosmarinic Acid C4H low borderline
Jreg02G0001800.1 Rosmarinic Acid C4H medium pass
Jreg02G0001800.2 Rosmarinic Acid C4H low borderline
Jreg02G0001810.1 Rosmarinic Acid C4H low borderline
Jreg02G0001820.1 Rosmarinic Acid C4H medium pass
Jreg02G0001860.1 Rosmarinic Acid C4H low borderline
Jreg02G0001870.1 Rosmarinic Acid C4H medium pass
Jreg02G0001870.2 Rosmarinic Acid C4H medium pass
Jreg02G0001880.1 Rosmarinic Acid C4H medium pass
Jreg02G0001900.1 Rosmarinic Acid C4H low borderline
Jreg02G0001910.1 Rosmarinic Acid C4H low borderline
Jreg02G0001920.1 Rosmarinic Acid C4H low borderline
Jreg02G0001930.1 Rosmarinic Acid C4H medium pass
Jreg02G0001940.1 Rosmarinic Acid C4H low borderline
Jreg02G0005880.1 Rosmarinic Acid C4H low borderline
Jreg02G0006430.1 Rosmarinic Acid C4H low borderline
Jreg02G0008300.1 Rosmarinic Acid C4H low borderline
Jreg02G0008310.1 Rosmarinic Acid C4H low borderline
Jreg02G0008330.1 Rosmarinic Acid C4H low borderline