PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Jreg04G0016190.1 Rosmarinic Acid C4H low borderline
Jreg04G0017760.1 Rosmarinic Acid C4H medium pass
Jreg04G0017770.1 Rosmarinic Acid C4H low borderline
Jreg04G0020470.1 Rosmarinic Acid C4H medium pass
Jreg05G0001530.1 Rosmarinic Acid C4H low borderline
Jreg05G0001540.1 Rosmarinic Acid C4H low borderline
Jreg05G0001820.1 Rosmarinic Acid C4H low borderline
Jreg05G0002220.1 Rosmarinic Acid C4H medium pass
Jreg05G0002230.1 Rosmarinic Acid C4H medium pass
Jreg05G0002240.1 Rosmarinic Acid C4H medium pass
Jreg05G0002250.1 Rosmarinic Acid C4H medium pass
Jreg05G0004920.1 Rosmarinic Acid C4H medium pass
Jreg05G0005520.1 Rosmarinic Acid C4H low borderline
Jreg05G0005520.2 Rosmarinic Acid C4H low borderline
Jreg05G0005540.1 Rosmarinic Acid C4H low borderline
Jreg05G0005720.1 Rosmarinic Acid C4H medium pass
Jreg05G0005730.1 Rosmarinic Acid C4H medium pass
Jreg05G0005740.1 Rosmarinic Acid C4H medium pass
Jreg05G0008330.1 Rosmarinic Acid C4H low borderline
Jreg05G0008350.1 Rosmarinic Acid C4H low borderline
Jreg05G0008360.1 Rosmarinic Acid C4H low borderline
Jreg05G0012450.1 Rosmarinic Acid C4H low borderline
Jreg06G0000990.1 Rosmarinic Acid C4H low borderline
Jreg06G0003650.1 Rosmarinic Acid C4H low borderline
Jreg06G0005140.1 Rosmarinic Acid C4H low borderline
Jreg06G0005150.1 Rosmarinic Acid C4H low borderline
Jreg06G0005160.1 Rosmarinic Acid C4H low borderline
Jreg06G0005170.1 Rosmarinic Acid C4H medium pass
Jreg06G0005260.1 Rosmarinic Acid C4H low borderline
Jreg06G0005270.1 Rosmarinic Acid C4H low borderline
Jreg06G0005280.1 Rosmarinic Acid C4H medium pass
Jreg06G0005290.1 Rosmarinic Acid C4H medium pass
Jreg06G0005300.1 Rosmarinic Acid C4H low borderline
Jreg06G0005310.1 Rosmarinic Acid C4H low borderline
Jreg06G0005320.1 Rosmarinic Acid C4H medium pass
Jreg06G0005330.1 Rosmarinic Acid C4H low borderline
Jreg06G0006120.1 Rosmarinic Acid C4H low borderline
Jreg06G0006970.1 Rosmarinic Acid C4H low borderline
Jreg06G0006990.1 Rosmarinic Acid C4H low borderline
Jreg06G0007000.1 Rosmarinic Acid C4H low borderline
Jreg06G0007010.1 Rosmarinic Acid C4H low borderline
Jreg06G0007030.1 Rosmarinic Acid C4H low borderline
Jreg06G0007040.1 Rosmarinic Acid C4H low borderline
Jreg06G0007050.1 Rosmarinic Acid C4H medium pass
Jreg06G0007060.1 Rosmarinic Acid C4H medium pass
Jreg06G0007070.1 Rosmarinic Acid C4H medium pass
Jreg06G0007080.1 Rosmarinic Acid C4H low borderline
Jreg06G0007090.1 Rosmarinic Acid C4H low borderline
Jreg06G0007100.1 Rosmarinic Acid C4H low borderline
Jreg06G0007110.1 Rosmarinic Acid C4H low borderline