PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Jreg06G0007110.2 Rosmarinic Acid C4H medium pass
Jreg06G0007120.1 Rosmarinic Acid C4H low borderline
Jreg06G0007140.1 Rosmarinic Acid C4H medium pass
Jreg06G0007160.1 Rosmarinic Acid C4H low borderline
Jreg06G0007790.1 Rosmarinic Acid C4H low borderline
Jreg06G0007830.1 Rosmarinic Acid C4H low borderline
Jreg06G0007840.1 Rosmarinic Acid C4H low borderline
Jreg06G0007850.1 Rosmarinic Acid C4H low borderline
Jreg06G0007860.1 Rosmarinic Acid C4H low borderline
Jreg06G0007870.1 Rosmarinic Acid C4H low borderline
Jreg06G0010530.1 Rosmarinic Acid C4H low borderline
Jreg07G0002580.1 Rosmarinic Acid C4H medium pass
Jreg07G0002590.1 Rosmarinic Acid C4H low borderline
Jreg07G0003450.1 Rosmarinic Acid C4H low borderline
Jreg07G0004910.1 Rosmarinic Acid C4H low borderline
Jreg07G0004950.1 Rosmarinic Acid C4H low borderline
Jreg07G0007990.1 Rosmarinic Acid C4H low borderline
Jreg07G0008340.1 Rosmarinic Acid C4H low borderline
Jreg07G0015610.1 Rosmarinic Acid C4H medium pass
Jreg07G0025430.1 Rosmarinic Acid C4H medium pass
Jreg07G0026320.1 Rosmarinic Acid C4H low borderline
Jreg07G0030620.1 Rosmarinic Acid C4H low borderline
Jreg07G0034990.1 Rosmarinic Acid C4H low borderline
Jreg07G0035000.1 Rosmarinic Acid C4H low borderline
Jreg08G0007130.1 Rosmarinic Acid C4H low borderline
Jreg08G0007140.1 Rosmarinic Acid C4H low borderline
Jreg08G0008590.1 Rosmarinic Acid C4H low borderline
Jreg08G0008630.1 Rosmarinic Acid C4H low borderline
Jreg08G0008670.1 Rosmarinic Acid C4H low borderline
Jreg08G0008690.1 Rosmarinic Acid C4H low borderline
Jreg08G0010500.1 Rosmarinic Acid C4H low borderline
Jreg08G0016130.1 Rosmarinic Acid C4H medium pass
Jreg09G0000980.1 Rosmarinic Acid C4H low borderline
Jreg09G0003800.1 Rosmarinic Acid C4H medium pass
Jreg09G0003810.1 Rosmarinic Acid C4H medium pass
Jreg09G0006300.1 Rosmarinic Acid C4H low borderline
Jreg09G0008680.1 Rosmarinic Acid C4H low borderline
Jreg09G0011210.1 Rosmarinic Acid C4H medium pass
Jreg09G0011220.1 Rosmarinic Acid C4H low borderline
Jreg09G0011230.1 Rosmarinic Acid C4H low borderline
Jreg09G0011240.1 Rosmarinic Acid C4H medium pass
Jreg09G0011240.2 Rosmarinic Acid C4H medium pass
Jreg09G0011600.1 Rosmarinic Acid C4H low borderline
Jreg10G0004690.1 Rosmarinic Acid C4H low borderline
Jreg10G0004690.2 Rosmarinic Acid C4H low borderline
Jreg10G0006240.1 Rosmarinic Acid C4H low borderline
Jreg10G0010640.1 Rosmarinic Acid C4H medium pass
Jreg10G0010650.1 Rosmarinic Acid C4H medium pass
Jreg10G0010660.1 Rosmarinic Acid C4H medium pass
Jreg10G0010670.1 Rosmarinic Acid C4H medium pass