PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Jreg03G0000480.1 Alkaloid T3O medium pass
Jreg03G0001320.1 Alkaloid T3O medium pass
Jreg03G0003710.1 Alkaloid T3O medium borderline
Jreg03G0003750.1 Alkaloid T3O medium borderline
Jreg03G0005640.2 Alkaloid T3O low borderline
Jreg03G0005670.1 Alkaloid T3O medium borderline
Jreg03G0005680.1 Alkaloid T3O medium borderline
Jreg03G0011670.1 Alkaloid T3O medium borderline
Jreg03G0011690.1 Alkaloid T3O medium borderline
Jreg03G0011710.1 Alkaloid T3O medium borderline
Jreg03G0013480.1 Alkaloid T3O medium pass
Jreg04G0016160.1 Alkaloid T3O medium borderline
Jreg04G0017760.1 Alkaloid T3O medium borderline
Jreg04G0017770.1 Alkaloid T3O medium borderline
Jreg04G0020140.1 Alkaloid T3O low borderline
Jreg04G0020140.2 Alkaloid T3O medium pass
Jreg05G0001820.1 Alkaloid T3O medium pass
Jreg05G0002220.1 Alkaloid T3O medium borderline
Jreg05G0002230.1 Alkaloid T3O medium borderline
Jreg05G0002240.1 Alkaloid T3O medium borderline
Jreg05G0002250.1 Alkaloid T3O medium borderline
Jreg05G0005870.1 Alkaloid T3O medium pass
Jreg05G0008330.1 Alkaloid T3O medium borderline
Jreg05G0008360.1 Alkaloid T3O medium borderline
Jreg05G0012000.1 Alkaloid T3O medium pass
Jreg06G0000990.1 Alkaloid T3O medium borderline
Jreg06G0005140.1 Alkaloid T3O medium borderline
Jreg06G0005150.1 Alkaloid T3O medium borderline
Jreg06G0005160.1 Alkaloid T3O medium borderline
Jreg06G0005170.1 Alkaloid T3O medium borderline
Jreg06G0005280.1 Alkaloid T3O medium borderline
Jreg06G0005290.1 Alkaloid T3O medium borderline
Jreg06G0005300.1 Alkaloid T3O medium borderline
Jreg06G0005310.1 Alkaloid T3O medium borderline
Jreg06G0006120.1 Alkaloid T3O medium pass
Jreg06G0006970.1 Alkaloid T3O medium borderline
Jreg06G0007000.1 Alkaloid T3O medium borderline
Jreg06G0007010.1 Alkaloid T3O medium borderline
Jreg06G0007030.1 Alkaloid T3O medium borderline
Jreg06G0007040.1 Alkaloid T3O medium borderline
Jreg06G0007060.1 Alkaloid T3O medium borderline
Jreg06G0007070.1 Alkaloid T3O medium borderline
Jreg06G0007080.1 Alkaloid T3O medium borderline
Jreg06G0007090.1 Alkaloid T3O medium borderline
Jreg06G0007100.1 Alkaloid T3O medium borderline
Jreg06G0007110.2 Alkaloid T3O medium borderline
Jreg06G0007140.1 Alkaloid T3O medium borderline
Jreg06G0016560.1 Alkaloid T3O medium pass
Jreg06G0017140.1 Alkaloid T3O low borderline
Jreg06G0017320.1 Alkaloid T3O low borderline