PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Jreg12G0017180.1 Flavonoid 4CL low borderline
Jreg12G0017180.2 Flavonoid 4CL medium pass
Jreg12G0017190.1 Flavonoid 4CL low borderline
Jreg12G0017190.2 Flavonoid 4CL medium pass
Jreg13G0005200.1 Flavonoid 4CL medium pass
Jreg13G0011460.1 Flavonoid 4CL medium pass
Jreg13G0011470.1 Flavonoid 4CL medium pass
Jreg13G0023910.1 Flavonoid 4CL medium pass
Jreg13G0024170.1 Flavonoid 4CL low borderline
Jreg14G0013350.1 Flavonoid 4CL medium pass
Jreg15G0002170.1 Flavonoid 4CL medium pass
Jreg16G0003390.1 Flavonoid 4CL low borderline
Jreg16G0003400.1 Flavonoid 4CL low borderline
Jreg16G0003410.1 Flavonoid 4CL low borderline
Jreg16G0003420.1 Flavonoid 4CL low borderline
Jreg16G0016770.1 Flavonoid 4CL low borderline
Jreg16G0017460.1 Flavonoid 4CL medium pass
Jreg01G0001270.1 Flavonoid ANR low borderline
Jreg01G0004150.1 Flavonoid ANR low borderline
Jreg01G0026320.1 Flavonoid ANR medium borderline
Jreg01G0026330.1 Flavonoid ANR medium borderline
Jreg01G0026340.1 Flavonoid ANR medium borderline
Jreg02G0011830.1 Flavonoid ANR low borderline
Jreg03G0008950.1 Flavonoid ANR medium borderline
Jreg05G0000440.1 Flavonoid ANR medium borderline
Jreg05G0006430.1 Flavonoid ANR medium borderline
Jreg05G0013710.1 Flavonoid ANR medium borderline
Jreg05G0013730.1 Flavonoid ANR medium borderline
Jreg05G0013740.1 Flavonoid ANR medium borderline
Jreg06G0006420.1 Flavonoid ANR low borderline
Jreg06G0008880.1 Flavonoid ANR medium borderline
Jreg07G0029900.1 Flavonoid ANR medium borderline
Jreg07G0030970.1 Flavonoid ANR medium borderline
Jreg09G0009380.1 Flavonoid ANR medium borderline
Jreg09G0009400.1 Flavonoid ANR medium borderline
Jreg09G0009440.1 Flavonoid ANR medium borderline
Jreg10G0002950.1 Flavonoid ANR low borderline
Jreg11G0016570.1 Flavonoid ANR medium pass
Jreg11G0016570.2 Flavonoid ANR medium pass
Jreg11G0019380.1 Flavonoid ANR medium borderline
Jreg12G0019360.1 Flavonoid ANR medium borderline
Jreg12G0019370.1 Flavonoid ANR medium borderline
Jreg12G0019380.1 Flavonoid ANR medium borderline
Jreg12G0019390.1 Flavonoid ANR medium borderline
Jreg13G0002610.1 Flavonoid ANR medium borderline
Jreg14G0000880.1 Flavonoid ANR medium borderline
Jreg14G0000900.1 Flavonoid ANR medium borderline
Jreg14G0000920.1 Flavonoid ANR medium borderline
Jreg14G0004710.1 Flavonoid ANR medium borderline
Jreg16G0003800.1 Flavonoid ANR low borderline