Juglans regia (juglans_regia)
Imported from atlas release summary for Juglans regia.
2569
Candidate Protein Records
2303
Pathway-Level Records
5323
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5323
Family-Level Calls
C3'H/CYP98A
5.84%
BAHD
5.67%
C4H
5.54%
IFS
3.95%
CYP76
3.91%
4CL
3.78%
UGT
3.48%
T3O
3.46%
Other Families
64.38%
More Families (97)
POD
184
3.46%
UFGT
177
3.33%
7DLGT
175
3.29%
F3H
152
2.86%
NMT
144
2.71%
CAD
122
2.29%
DWF4/CYP90B1
115
2.16%
CAS
101
1.9%
BR6OX2/CYP85A2
94
1.77%
CODM/T6ODM
93
1.75%
SMT1/SMT2/SMT3
84
1.58%
STR
80
1.5%
F3'H/CYP75B
80
1.5%
TPS
73
1.37%
TRI/TRII
70
1.32%
GES
69
1.3%
H6H
66
1.24%
CYP71
66
1.24%
HCT
62
1.16%
SGD
60
1.13%
GS
57
1.07%
LAC
55
1.03%
CYP90D1
54
1.01%
COMT
53
1.0%
CSE
50
0.94%
IFR
49
0.92%
PYKS
44
0.83%
PAL
42
0.79%
RAS
41
0.77%
TAT
39
0.73%
BBE
37
0.7%
IO
37
0.7%
PMT
36
0.68%
T16H
36
0.68%
FNS
36
0.68%
16OMT
33
0.62%
ANR
33
0.62%
COR
31
0.58%
CNMT
30
0.56%
LAMT
28
0.53%
G8O/G8H
27
0.51%
CPD/CYP90A1
26
0.49%
CCR
25
0.47%
SLS
24
0.45%
8HGO
24
0.45%
F5H/CYP84A
24
0.45%
7DLH
23
0.43%
NCS
23
0.43%
BR6OX1/CYP85A1
22
0.41%
F3'5'H/CYP75A
20
0.38%
ROT3/CYP90C1
18
0.34%
CYP719
15
0.28%
CPR
15
0.28%
MVD
14
0.26%
CHS
13
0.24%
CYP51G1
13
0.24%
SQE
13
0.24%
MPO
12
0.23%
GGPPS
12
0.23%
DFR
11
0.21%
CCoAOMT
11
0.21%
SQS/FDFT1
10
0.19%
AACT
10
0.19%
FPPS
10
0.19%
ANS/LDOX
9
0.17%
MVK
9
0.17%
DXS
9
0.17%
ISY
8
0.15%
CHI
8
0.15%
DET2
8
0.15%
TYDC_DDC
6
0.11%
HPPR
6
0.11%
SMO1/SMO2
6
0.11%
MCT/IspD
5
0.09%
TDC
4
0.08%
CYP80B1
4
0.08%
DWF7
4
0.08%
PMK
4
0.08%
HMGS
3
0.06%
CMK/IspE
3
0.06%
HMGR
3
0.06%
6OMT_4OMT_SOMT
2
0.04%
XMT_MXMT_DXMT
2
0.04%
ADC
2
0.04%
FLS
2
0.04%
HYD1
2
0.04%
DWF1
2
0.04%
MDS/IspF
2
0.04%
IDI
2
0.04%
HDR/IspH
2
0.04%
CYP80F1
1
0.02%
ODC
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
DWF5
1
0.02%
DXR
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 652 | 20 | BAHD (258) | View species results |
| Alkaloid pathway | 526 | 24 | 7DLGT (80) | View species results |
| Phenylpropanoid pathway | 459 | 11 | POD (181) | View species results |
| Flavonoid pathway | 278 | 12 | UFGT (175) | View species results |
| Rosmarinic acid pathway | 209 | 7 | C4H (86) | View species results |
| Steroid pathway | 179 | 11 | CAS (88) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1907 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 405 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Jreg10G0004690.2 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Jreg10G0020230.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Jreg12G0019180.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Jreg12G0019190.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Jreg16G0011810.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Jreg16G0011820.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Jreg01G0013150.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg01G0023290.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Jreg01G0023310.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Jreg01G0026840.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg01G0026840.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg02G0019050.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg02G0020350.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg02G0023770.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg02G0023780.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg03G0001180.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg03G0002770.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg03G0002770.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg03G0002780.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg03G0004350.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg03G0005110.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Jreg03G0005120.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Jreg03G0019550.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg03G0020780.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg04G0018720.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg04G0020220.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg05G0003570.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg05G0003570.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg05G0003580.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg05G0009660.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg05G0010860.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Jreg05G0013640.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg05G0013650.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg06G0001890.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg06G0001890.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg06G0010630.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg06G0012400.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| Jreg06G0014770.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg07G0011550.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg07G0026960.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg07G0028340.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg07G0028360.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg07G0028380.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg07G0032010.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg07G0033070.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg08G0014010.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg08G0017320.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg08G0017920.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg08G0017930.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Jreg08G0017930.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |