PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Jreg12G0016220.1 Steroid CYP90D1 medium borderline
Jreg12G0022160.1 Steroid CYP90D1 medium borderline
Jreg14G0000300.1 Steroid CYP90D1 low borderline
Jreg14G0005550.1 Steroid CYP90D1 low borderline
Jreg14G0005710.1 Steroid CYP90D1 low borderline
Jreg15G0001390.1 Steroid CYP90D1 medium borderline
Jreg15G0005450.1 Steroid CYP90D1 low borderline
Jreg15G0011110.1 Steroid CYP90D1 medium borderline
Jreg15G0011120.1 Steroid CYP90D1 medium borderline
Jreg15G0011140.1 Steroid CYP90D1 low borderline
Jreg16G0013520.1 Steroid CYP90D1 low borderline
Jreg03G0023020.1 Steroid DET2 medium pass
Jreg06G0014160.1 Steroid DET2 low borderline
Jreg06G0014170.1 Steroid DET2 low borderline
Jreg06G0014180.1 Steroid DET2 low borderline
Jreg07G0033810.1 Steroid DET2 low borderline
Jreg12G0021030.1 Steroid DET2 low borderline
Jreg14G0005060.1 Steroid DET2 low borderline
Jreg14G0005070.1 Steroid DET2 low borderline
Jreg16G0006760.1 Steroid DWF1 medium pass
Jreg16G0006770.1 Steroid DWF1 medium pass
Jreg01G0005190.1 Steroid DWF4/CYP90B1 medium borderline
Jreg01G0006050.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0011690.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014800.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014810.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014820.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014830.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014880.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014930.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014940.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014950.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0014980.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0023660.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0029300.1 Steroid DWF4/CYP90B1 low borderline
Jreg01G0029320.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001630.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001730.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001750.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001860.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001870.2 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001900.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001910.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001930.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0001940.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0005880.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0008280.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0008290.1 Steroid DWF4/CYP90B1 low borderline
Jreg02G0017290.2 Steroid DWF4/CYP90B1 low borderline
Jreg02G0017730.1 Steroid DWF4/CYP90B1 low borderline