Kandelia obovata (kandelia_obovata)
Imported from atlas release summary for Kandelia obovata.
860
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
860
Candidate Genes
BAHD
7.31%
C3'H/CYP98A
5.04%
C4H
4.64%
4CL
4.24%
POD
3.98%
UGT
3.33%
7DLGT
3.28%
F3H
3.18%
Other Families
65.0%
More Families (94)
T3O
61
3.08%
UFGT
61
3.08%
CYP76
61
3.08%
IFS
60
3.03%
NMT
51
2.57%
IFR
41
2.07%
CODM/T6ODM
40
2.02%
STR
39
1.97%
CAD
39
1.97%
DWF4/CYP90B1
39
1.97%
CYP71
32
1.61%
SMT1/SMT2/SMT3
31
1.56%
F3'H/CYP75B
30
1.51%
CAS
30
1.51%
TRI/TRII
28
1.41%
BR6OX2/CYP85A2
27
1.36%
H6H
26
1.31%
PMT
26
1.31%
HCT
26
1.31%
GS
21
1.06%
PYKS
21
1.06%
SGD
20
1.01%
CYP90D1
20
1.01%
CSE
19
0.96%
COMT
18
0.91%
TPS
18
0.91%
GES
17
0.86%
LAC
17
0.86%
TAT
17
0.86%
ANR
15
0.76%
RAS
15
0.76%
F3'5'H/CYP75A
13
0.66%
CCR
13
0.66%
SLS
12
0.61%
16OMT
12
0.61%
NCS
11
0.55%
IO
11
0.55%
G8O/G8H
10
0.5%
8HGO
10
0.5%
BR6OX1/CYP85A1
10
0.5%
AACT
10
0.5%
T16H
9
0.45%
PAL
9
0.45%
CPD/CYP90A1
9
0.45%
CYP719
8
0.4%
COR
8
0.4%
ANS/LDOX
8
0.4%
CYP51G1
8
0.4%
CNMT
7
0.35%
DFR
7
0.35%
CPR
7
0.35%
MPO
6
0.3%
HPPR
6
0.3%
DXS
6
0.3%
BBE
5
0.25%
LAMT
5
0.25%
CHS
5
0.25%
FNS
5
0.25%
GGPPS
5
0.25%
MVD
5
0.25%
CYP80B1
4
0.2%
ADC
4
0.2%
CCoAOMT
4
0.2%
F5H/CYP84A
4
0.2%
DET2
4
0.2%
MVK
4
0.2%
MCT/IspD
4
0.2%
FPPS
4
0.2%
7DLH
3
0.15%
ROT3/CYP90C1
3
0.15%
SMO1/SMO2
3
0.15%
SQS/FDFT1
3
0.15%
HMGS
3
0.15%
HDS/IspG
3
0.15%
IDI
3
0.15%
HMGR
3
0.15%
TYDC_DDC
2
0.1%
FLS
2
0.1%
CHI
2
0.1%
HYD1
2
0.1%
DWF5
2
0.1%
SQE
2
0.1%
MDS/IspF
2
0.1%
PMK
2
0.1%
HDR/IspH
2
0.1%
CYP80F1
1
0.05%
ISY
1
0.05%
TDC
1
0.05%
DWF7
1
0.05%
CPI1
1
0.05%
DWF1
1
0.05%
FK
1
0.05%
CMK/IspE
1
0.05%
DXR
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 265 | 19 | BAHD (122) | View species results |
| Alkaloid pathway | 180 | 18 | NMT (27) | View species results |
| Phenylpropanoid pathway | 168 | 11 | POD (73) | View species results |
| Flavonoid pathway | 109 | 10 | UFGT (56) | View species results |
| Rosmarinic acid pathway | 82 | 7 | C4H (25) | View species results |
| Steroid pathway | 56 | 11 | CAS (26) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 627 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 186 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| KoboGWHACBH000000250123680.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| KoboGWHACBH000000280125070.1 | Alkaloid | GES | medium | pass | GES__00008__sp_Q84ZW8_ACSS_MAIZE |
| KoboGWHACBH000000280125080.1 | Alkaloid | GES | medium | pass | GES__00008__sp_Q84ZW8_ACSS_MAIZE |
| KoboGWHACBH000000460136870.1 | Alkaloid | GES | medium | pass | GES__00010__sp_Q93YV0_GES_ARATH |
| KoboGWHACBH000000460136890.1 | Alkaloid | GES | medium | pass | GES__00010__sp_Q93YV0_GES_ARATH |
| KoboGWHACBH000000690137390.1 | Alkaloid | GES | medium | pass | GES__00008__sp_Q84ZW8_ACSS_MAIZE |
| KoboGWHACBH000000690140680.1 | Alkaloid | GES | low | borderline | GES__00011__sp_R9QMR5_ATERP_PINBN |
| KoboGWHACBH000000690142730.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| KoboGWHACBH000000690142740.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| KoboGWHACBH000000690142750.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| KoboGWHACBH000000690142760.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| KoboGWHACBH000000710160610.1 | Alkaloid | GES | medium | pass | GES__00008__sp_Q84ZW8_ACSS_MAIZE |
| KoboGWHACBH000000710161540.1 | Alkaloid | GES | medium | pass | GES__00001__sp_A0A7G5KLV3_TPS4_CANOD |
| KoboGWHACBH000000730181560.1 | Alkaloid | GES | low | borderline | GES__00010__sp_Q93YV0_GES_ARATH |
| KoboGWHACBH000000730181570.1 | Alkaloid | GES | low | borderline | GES__00010__sp_Q93YV0_GES_ARATH |
| KoboGWHACBH000000730183130.1 | Alkaloid | GES | medium | pass | GES__00004__sp_E2E2N7_BCGS_ORIVU |
| KoboGWHACBH000000740191280.1 | Alkaloid | GES | medium | pass | GES__00009__sp_Q8GUE4_GERS_CINTE |