PlantSME Plant secondary metabolism enzyme database

Kandelia obovata (kandelia_obovata)

Imported from atlas release summary for Kandelia obovata.

860
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.81% Alkaloid pathway 20.93% Phenylpropanoid pathway 19.53% Flavonoid pathway 12.67% Rosmarinic acid pathway 9.53% Steroid pathway 6.51%
Family Distribution
BAHD 7.31% C3'H/CYP98A 5.04% C4H 4.64% 4CL 4.24% POD 3.98% UGT 3.33% 7DLGT 3.28% F3H 3.18%
Other Families 65.0%
More Families (94)
T3O 61 3.08% UFGT 61 3.08% CYP76 61 3.08% IFS 60 3.03% NMT 51 2.57% IFR 41 2.07% CODM/T6ODM 40 2.02% STR 39 1.97% CAD 39 1.97% DWF4/CYP90B1 39 1.97% CYP71 32 1.61% SMT1/SMT2/SMT3 31 1.56% F3'H/CYP75B 30 1.51% CAS 30 1.51% TRI/TRII 28 1.41% BR6OX2/CYP85A2 27 1.36% H6H 26 1.31% PMT 26 1.31% HCT 26 1.31% GS 21 1.06% PYKS 21 1.06% SGD 20 1.01% CYP90D1 20 1.01% CSE 19 0.96% COMT 18 0.91% TPS 18 0.91% GES 17 0.86% LAC 17 0.86% TAT 17 0.86% ANR 15 0.76% RAS 15 0.76% F3'5'H/CYP75A 13 0.66% CCR 13 0.66% SLS 12 0.61% 16OMT 12 0.61% NCS 11 0.55% IO 11 0.55% G8O/G8H 10 0.5% 8HGO 10 0.5% BR6OX1/CYP85A1 10 0.5% AACT 10 0.5% T16H 9 0.45% PAL 9 0.45% CPD/CYP90A1 9 0.45% CYP719 8 0.4% COR 8 0.4% ANS/LDOX 8 0.4% CYP51G1 8 0.4% CNMT 7 0.35% DFR 7 0.35% CPR 7 0.35% MPO 6 0.3% HPPR 6 0.3% DXS 6 0.3% BBE 5 0.25% LAMT 5 0.25% CHS 5 0.25% FNS 5 0.25% GGPPS 5 0.25% MVD 5 0.25% CYP80B1 4 0.2% ADC 4 0.2% CCoAOMT 4 0.2% F5H/CYP84A 4 0.2% DET2 4 0.2% MVK 4 0.2% MCT/IspD 4 0.2% FPPS 4 0.2% 7DLH 3 0.15% ROT3/CYP90C1 3 0.15% SMO1/SMO2 3 0.15% SQS/FDFT1 3 0.15% HMGS 3 0.15% HDS/IspG 3 0.15% IDI 3 0.15% HMGR 3 0.15% TYDC_DDC 2 0.1% FLS 2 0.1% CHI 2 0.1% HYD1 2 0.1% DWF5 2 0.1% SQE 2 0.1% MDS/IspF 2 0.1% PMK 2 0.1% HDR/IspH 2 0.1% CYP80F1 1 0.05% ISY 1 0.05% TDC 1 0.05% DWF7 1 0.05% CPI1 1 0.05% DWF1 1 0.05% FK 1 0.05% CMK/IspE 1 0.05% DXR 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 265 19 BAHD (122) View species results
Alkaloid pathway 180 18 NMT (27) View species results
Phenylpropanoid pathway 168 11 POD (73) View species results
Flavonoid pathway 109 10 UFGT (56) View species results
Rosmarinic acid pathway 82 7 C4H (25) View species results
Steroid pathway 56 11 CAS (26) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 627 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
KoboGWHACBH000000030022540.1 Alkaloid IO low borderline
KoboGWHACBH000000080054480.1 Alkaloid IO medium borderline
KoboGWHACBH000000120075530.1 Alkaloid IO low borderline
KoboGWHACBH000000120082790.1 Alkaloid IO medium borderline
KoboGWHACBH000000160096930.1 Alkaloid IO medium borderline
KoboGWHACBH000000220107780.1 Alkaloid IO low borderline
KoboGWHACBH000000230117000.1 Alkaloid IO low borderline
KoboGWHACBH000000230118750.1 Alkaloid IO medium borderline
KoboGWHACBH000000380129530.1 Alkaloid IO low borderline
KoboGWHACBH000000690149110.1 Alkaloid IO medium borderline
KoboGWHACBH000000720170120.1 Alkaloid IO medium borderline