Kandelia obovata (kandelia_obovata)
Imported from atlas release summary for Kandelia obovata.
860
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
860
Candidate Genes
BAHD
7.31%
C3'H/CYP98A
5.04%
C4H
4.64%
4CL
4.24%
POD
3.98%
UGT
3.33%
7DLGT
3.28%
F3H
3.18%
Other Families
65.0%
More Families (94)
T3O
61
3.08%
UFGT
61
3.08%
CYP76
61
3.08%
IFS
60
3.03%
NMT
51
2.57%
IFR
41
2.07%
CODM/T6ODM
40
2.02%
STR
39
1.97%
CAD
39
1.97%
DWF4/CYP90B1
39
1.97%
CYP71
32
1.61%
SMT1/SMT2/SMT3
31
1.56%
F3'H/CYP75B
30
1.51%
CAS
30
1.51%
TRI/TRII
28
1.41%
BR6OX2/CYP85A2
27
1.36%
H6H
26
1.31%
PMT
26
1.31%
HCT
26
1.31%
GS
21
1.06%
PYKS
21
1.06%
SGD
20
1.01%
CYP90D1
20
1.01%
CSE
19
0.96%
COMT
18
0.91%
TPS
18
0.91%
GES
17
0.86%
LAC
17
0.86%
TAT
17
0.86%
ANR
15
0.76%
RAS
15
0.76%
F3'5'H/CYP75A
13
0.66%
CCR
13
0.66%
SLS
12
0.61%
16OMT
12
0.61%
NCS
11
0.55%
IO
11
0.55%
G8O/G8H
10
0.5%
8HGO
10
0.5%
BR6OX1/CYP85A1
10
0.5%
AACT
10
0.5%
T16H
9
0.45%
PAL
9
0.45%
CPD/CYP90A1
9
0.45%
CYP719
8
0.4%
COR
8
0.4%
ANS/LDOX
8
0.4%
CYP51G1
8
0.4%
CNMT
7
0.35%
DFR
7
0.35%
CPR
7
0.35%
MPO
6
0.3%
HPPR
6
0.3%
DXS
6
0.3%
BBE
5
0.25%
LAMT
5
0.25%
CHS
5
0.25%
FNS
5
0.25%
GGPPS
5
0.25%
MVD
5
0.25%
CYP80B1
4
0.2%
ADC
4
0.2%
CCoAOMT
4
0.2%
F5H/CYP84A
4
0.2%
DET2
4
0.2%
MVK
4
0.2%
MCT/IspD
4
0.2%
FPPS
4
0.2%
7DLH
3
0.15%
ROT3/CYP90C1
3
0.15%
SMO1/SMO2
3
0.15%
SQS/FDFT1
3
0.15%
HMGS
3
0.15%
HDS/IspG
3
0.15%
IDI
3
0.15%
HMGR
3
0.15%
TYDC_DDC
2
0.1%
FLS
2
0.1%
CHI
2
0.1%
HYD1
2
0.1%
DWF5
2
0.1%
SQE
2
0.1%
MDS/IspF
2
0.1%
PMK
2
0.1%
HDR/IspH
2
0.1%
CYP80F1
1
0.05%
ISY
1
0.05%
TDC
1
0.05%
DWF7
1
0.05%
CPI1
1
0.05%
DWF1
1
0.05%
FK
1
0.05%
CMK/IspE
1
0.05%
DXR
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 265 | 19 | BAHD (122) | View species results |
| Alkaloid pathway | 180 | 18 | NMT (27) | View species results |
| Phenylpropanoid pathway | 168 | 11 | POD (73) | View species results |
| Flavonoid pathway | 109 | 10 | UFGT (56) | View species results |
| Rosmarinic acid pathway | 82 | 7 | C4H (25) | View species results |
| Steroid pathway | 56 | 11 | CAS (26) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 627 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 186 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| KoboGWHACBH000000010000770.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| KoboGWHACBH000000010001420.1 | Alkaloid | NMT | medium | borderline | NMT__00043__sp_Q8H0D2_DXMT1_COFAR |
| KoboGWHACBH000000010002660.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| KoboGWHACBH000000010004970.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| KoboGWHACBH000000010006110.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| KoboGWHACBH000000010008040.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| KoboGWHACBH000000010009030.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| KoboGWHACBH000000010009260.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| KoboGWHACBH000000020017470.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| KoboGWHACBH000000020018800.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| KoboGWHACBH000000030022750.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| KoboGWHACBH000000030023910.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| KoboGWHACBH000000050035690.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| KoboGWHACBH000000050035970.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| KoboGWHACBH000000050036160.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| KoboGWHACBH000000070045390.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| KoboGWHACBH000000070046530.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| KoboGWHACBH000000070046550.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| KoboGWHACBH000000070047780.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| KoboGWHACBH000000080050240.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| KoboGWHACBH000000080052800.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| KoboGWHACBH000000090056660.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| KoboGWHACBH000000090057100.1 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| KoboGWHACBH000000100063830.1 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| KoboGWHACBH000000120073580.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| KoboGWHACBH000000120077140.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| KoboGWHACBH000000120077440.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| KoboGWHACBH000000120081250.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| KoboGWHACBH000000130086030.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| KoboGWHACBH000000130087210.1 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| KoboGWHACBH000000140088560.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| KoboGWHACBH000000150092280.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| KoboGWHACBH000000150094720.1 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| KoboGWHACBH000000160097180.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| KoboGWHACBH000000230110870.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| KoboGWHACBH000000230122190.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| KoboGWHACBH000000280125020.1 | Alkaloid | NMT | low | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| KoboGWHACBH000000280125240.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| KoboGWHACBH000000380126250.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| KoboGWHACBH000000380127510.1 | Alkaloid | NMT | low | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| KoboGWHACBH000000380131860.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| KoboGWHACBH000000380133140.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| KoboGWHACBH000000690138180.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| KoboGWHACBH000000690141780.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| KoboGWHACBH000000690143230.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| KoboGWHACBH000000700154630.1 | Alkaloid | NMT | medium | borderline | NMT__00062__sp_Q9SCP7_NAMT1_ARATH |
| KoboGWHACBH000000730177900.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| KoboGWHACBH000000730177980.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| KoboGWHACBH000000730180190.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| KoboGWHACBH000000740190480.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |