PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsat09G0029080.3 Alkaloid MPO low borderline
Lsat01G0013830.1 Alkaloid NCS medium borderline
Lsat01G0014840.1 Alkaloid NCS low borderline
Lsat01G0014840.2 Alkaloid NCS low borderline
Lsat01G0014840.4 Alkaloid NCS low borderline
Lsat01G0014840.5 Alkaloid NCS low borderline
Lsat01G0014850.1 Alkaloid NCS low borderline
Lsat01G0015390.1 Alkaloid NCS medium pass
Lsat01G0015400.1 Alkaloid NCS low borderline
Lsat01G0015410.1 Alkaloid NCS low borderline
Lsat01G0015430.1 Alkaloid NCS low borderline
Lsat01G0015450.1 Alkaloid NCS low borderline
Lsat01G0015460.1 Alkaloid NCS low borderline
Lsat01G0015460.2 Alkaloid NCS low borderline
Lsat01G0015480.1 Alkaloid NCS low borderline
Lsat01G0020100.1 Alkaloid NCS medium pass
Lsat02G0005210.3 Alkaloid NCS medium borderline
Lsat03G0028030.1 Alkaloid NCS medium pass
Lsat03G0035130.1 Alkaloid NCS medium borderline
Lsat03G0035130.2 Alkaloid NCS medium borderline
Lsat03G0035140.1 Alkaloid NCS medium borderline
Lsat03G0035210.1 Alkaloid NCS medium borderline
Lsat03G0035210.3 Alkaloid NCS medium borderline
Lsat04G0017120.1 Alkaloid NCS medium borderline
Lsat04G0031040.1 Alkaloid NCS medium borderline
Lsat05G0001920.2 Alkaloid NCS low borderline
Lsat05G0001930.1 Alkaloid NCS low borderline
Lsat05G0021470.1 Alkaloid NCS medium borderline
Lsat05G0021480.1 Alkaloid NCS medium borderline
Lsat06G0004180.1 Alkaloid NCS low borderline
Lsat06G0011330.1 Alkaloid NCS medium pass
Lsat06G0011330.2 Alkaloid NCS medium pass
Lsat06G0011340.1 Alkaloid NCS medium pass
Lsat06G0020430.1 Alkaloid NCS medium borderline
Lsat06G0025650.1 Alkaloid NCS medium borderline
Lsat06G0031370.1 Alkaloid NCS medium borderline
Lsat06G0033240.1 Alkaloid NCS low borderline
Lsat06G0033250.1 Alkaloid NCS medium pass
Lsat06G0033300.1 Alkaloid NCS low borderline
Lsat07G0005610.1 Alkaloid NCS medium borderline
Lsat07G0005620.1 Alkaloid NCS medium borderline
Lsat07G0005800.1 Alkaloid NCS medium borderline
Lsat07G0005800.2 Alkaloid NCS medium borderline
Lsat07G0005800.3 Alkaloid NCS medium borderline
Lsat07G0008850.1 Alkaloid NCS medium borderline
Lsat07G0008850.2 Alkaloid NCS medium borderline
Lsat08G0008260.1 Alkaloid NCS medium pass
Lsat08G0030320.1 Alkaloid NCS medium borderline
Lsat08G0030330.1 Alkaloid NCS medium borderline
Lsat08G0036040.1 Alkaloid NCS medium borderline