PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsat08G0036040.2 Alkaloid NCS medium borderline
Lsat09G0003800.2 Alkaloid NCS low borderline
Lsat09G0030400.2 Alkaloid NCS medium borderline
Lsat00G0001100.2 Alkaloid NMT medium borderline
Lsat01G0005800.1 Alkaloid NMT medium borderline
Lsat01G0005800.2 Alkaloid NMT medium borderline
Lsat01G0006980.1 Alkaloid NMT medium pass
Lsat01G0006980.2 Alkaloid NMT medium pass
Lsat01G0015150.1 Alkaloid NMT low borderline
Lsat01G0015150.2 Alkaloid NMT low borderline
Lsat01G0018590.1 Alkaloid NMT low borderline
Lsat01G0018590.2 Alkaloid NMT low borderline
Lsat01G0024620.1 Alkaloid NMT medium pass
Lsat01G0033280.1 Alkaloid NMT low borderline
Lsat01G0033280.2 Alkaloid NMT medium borderline
Lsat01G0033280.3 Alkaloid NMT low borderline
Lsat01G0034640.2 Alkaloid NMT low borderline
Lsat02G0003910.1 Alkaloid NMT medium borderline
Lsat02G0003910.2 Alkaloid NMT medium borderline
Lsat02G0003910.3 Alkaloid NMT medium borderline
Lsat02G0005190.2 Alkaloid NMT medium borderline
Lsat02G0005190.3 Alkaloid NMT medium borderline
Lsat02G0010710.1 Alkaloid NMT medium pass
Lsat02G0016490.1 Alkaloid NMT medium pass
Lsat02G0016490.2 Alkaloid NMT medium pass
Lsat02G0017100.1 Alkaloid NMT medium pass
Lsat02G0017100.2 Alkaloid NMT medium pass
Lsat02G0017100.3 Alkaloid NMT medium pass
Lsat02G0020580.1 Alkaloid NMT medium pass
Lsat02G0020580.2 Alkaloid NMT medium pass
Lsat02G0023510.1 Alkaloid NMT medium pass
Lsat02G0027100.1 Alkaloid NMT medium pass
Lsat02G0027100.2 Alkaloid NMT medium pass
Lsat02G0030310.1 Alkaloid NMT medium borderline
Lsat02G0031570.1 Alkaloid NMT low borderline
Lsat02G0032820.2 Alkaloid NMT low borderline
Lsat02G0032820.3 Alkaloid NMT low borderline
Lsat02G0040560.1 Alkaloid NMT medium pass
Lsat02G0040560.2 Alkaloid NMT medium pass
Lsat03G0015070.1 Alkaloid NMT medium borderline
Lsat03G0016740.1 Alkaloid NMT medium pass
Lsat03G0022190.1 Alkaloid NMT medium pass
Lsat03G0023590.1 Alkaloid NMT medium borderline
Lsat03G0023600.1 Alkaloid NMT medium borderline
Lsat03G0023600.2 Alkaloid NMT medium borderline
Lsat03G0030760.1 Alkaloid NMT medium pass
Lsat03G0030760.2 Alkaloid NMT medium pass
Lsat03G0039320.2 Alkaloid NMT medium borderline
Lsat04G0000060.1 Alkaloid NMT medium pass
Lsat04G0000060.2 Alkaloid NMT medium pass