PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Lsat03G0011660.1 Alkaloid 7DLH medium borderline
Lsat03G0011670.1 Alkaloid 7DLH medium borderline
Lsat03G0011670.2 Alkaloid 7DLH medium borderline
Lsat03G0011670.3 Alkaloid 7DLH medium borderline
Lsat03G0011680.1 Alkaloid 7DLH medium borderline
Lsat03G0011690.1 Alkaloid 7DLH medium borderline
Lsat03G0011760.1 Alkaloid 7DLH medium borderline
Lsat03G0011760.2 Alkaloid 7DLH medium borderline
Lsat03G0011760.3 Alkaloid 7DLH medium borderline
Lsat04G0007200.1 Alkaloid 7DLH medium borderline
Lsat04G0014820.1 Alkaloid 7DLH low borderline
Lsat05G0023900.1 Alkaloid 7DLH medium borderline
Lsat05G0023900.2 Alkaloid 7DLH medium borderline
Lsat05G0050700.1 Alkaloid 7DLH medium borderline
Lsat06G0025030.1 Alkaloid 7DLH medium borderline
Lsat08G0008590.1 Alkaloid 7DLH medium borderline
Lsat08G0008590.2 Alkaloid 7DLH medium borderline
Lsat08G0008830.1 Alkaloid 7DLH medium borderline
Lsat08G0008830.2 Alkaloid 7DLH medium borderline
Lsat08G0008850.1 Alkaloid 7DLH medium borderline
Lsat08G0008850.2 Alkaloid 7DLH medium borderline
Lsat08G0009340.1 Alkaloid 7DLH medium borderline
Lsat08G0009340.2 Alkaloid 7DLH medium borderline
Lsat08G0010360.1 Alkaloid 7DLH medium borderline
Lsat08G0010370.1 Alkaloid 7DLH medium borderline
Lsat08G0010380.1 Alkaloid 7DLH medium borderline
Lsat08G0010400.1 Alkaloid 7DLH medium borderline
Lsat08G0010700.1 Alkaloid 7DLH medium borderline
Lsat08G0010710.1 Alkaloid 7DLH medium borderline
Lsat08G0010710.2 Alkaloid 7DLH medium borderline
Lsat08G0010710.4 Alkaloid 7DLH medium borderline
Lsat08G0010730.1 Alkaloid 7DLH medium borderline
Lsat08G0010730.2 Alkaloid 7DLH medium borderline
Lsat08G0013230.1 Alkaloid 7DLH medium borderline
Lsat08G0013230.2 Alkaloid 7DLH medium borderline
Lsat08G0019940.2 Alkaloid 7DLH low borderline
Lsat08G0022350.1 Alkaloid 7DLH medium borderline
Lsat08G0041970.1 Alkaloid 7DLH medium borderline
Lsat08G0042330.1 Alkaloid 7DLH medium borderline
Lsat09G0006590.1 Alkaloid 7DLH medium pass
Lsat09G0006590.2 Alkaloid 7DLH medium borderline
Lsat09G0008780.1 Alkaloid 7DLH medium borderline
Lsat09G0008780.2 Alkaloid 7DLH medium borderline
Lsat09G0018860.1 Alkaloid 7DLH medium borderline
Lsat09G0023850.4 Alkaloid 7DLH medium borderline
Lsat09G0028860.1 Alkaloid 7DLH medium borderline
Lsat09G0028860.2 Alkaloid 7DLH medium borderline
Lsat01G0025920.1 Alkaloid 8HGO medium borderline
Lsat01G0025920.2 Alkaloid 8HGO medium borderline
Lsat03G0004350.1 Alkaloid 8HGO medium borderline