PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Lsat03G0004350.2 Alkaloid 8HGO medium borderline
Lsat03G0025930.1 Alkaloid 8HGO medium pass
Lsat03G0025930.2 Alkaloid 8HGO low borderline
Lsat03G0028290.1 Alkaloid 8HGO low borderline
Lsat03G0028290.2 Alkaloid 8HGO low borderline
Lsat04G0026250.1 Alkaloid 8HGO low borderline
Lsat05G0004570.1 Alkaloid 8HGO low borderline
Lsat05G0007090.1 Alkaloid 8HGO low borderline
Lsat05G0012110.1 Alkaloid 8HGO low borderline
Lsat05G0017030.1 Alkaloid 8HGO medium borderline
Lsat05G0026140.1 Alkaloid 8HGO low borderline
Lsat05G0026140.2 Alkaloid 8HGO low borderline
Lsat05G0033590.1 Alkaloid 8HGO low borderline
Lsat05G0033590.2 Alkaloid 8HGO low borderline
Lsat06G0003640.1 Alkaloid 8HGO medium borderline
Lsat06G0003640.2 Alkaloid 8HGO medium borderline
Lsat06G0009540.1 Alkaloid 8HGO medium borderline
Lsat06G0028120.1 Alkaloid 8HGO medium borderline
Lsat06G0028210.1 Alkaloid 8HGO medium borderline
Lsat06G0028210.2 Alkaloid 8HGO medium borderline
Lsat06G0028220.1 Alkaloid 8HGO medium borderline
Lsat06G0028240.1 Alkaloid 8HGO medium borderline
Lsat06G0028250.1 Alkaloid 8HGO medium pass
Lsat06G0028250.2 Alkaloid 8HGO medium pass
Lsat06G0028260.1 Alkaloid 8HGO medium borderline
Lsat08G0009500.1 Alkaloid 8HGO medium borderline
Lsat08G0009500.2 Alkaloid 8HGO medium borderline
Lsat08G0009510.1 Alkaloid 8HGO medium borderline
Lsat08G0009520.1 Alkaloid 8HGO medium pass
Lsat08G0009520.2 Alkaloid 8HGO medium borderline
Lsat08G0009530.1 Alkaloid 8HGO medium borderline
Lsat08G0009530.2 Alkaloid 8HGO medium borderline
Lsat08G0009540.1 Alkaloid 8HGO medium borderline
Lsat08G0009540.2 Alkaloid 8HGO medium borderline
Lsat08G0026670.1 Alkaloid 8HGO low borderline
Lsat08G0026670.2 Alkaloid 8HGO low borderline
Lsat08G0028420.1 Alkaloid 8HGO medium borderline
Lsat08G0028420.2 Alkaloid 8HGO medium borderline
Lsat01G0006760.1 Alkaloid ADC medium pass
Lsat03G0014030.1 Alkaloid ADC medium pass
Lsat03G0038470.1 Alkaloid ADC medium pass
Lsat04G0019760.1 Alkaloid ADC medium pass
Lsat00G0002710.1 Alkaloid BBE low borderline
Lsat00G0002710.2 Alkaloid BBE medium borderline
Lsat00G0002710.3 Alkaloid BBE medium borderline
Lsat01G0001980.1 Alkaloid BBE medium borderline
Lsat01G0008310.1 Alkaloid BBE medium borderline
Lsat01G0008310.2 Alkaloid BBE medium borderline
Lsat01G0013680.1 Alkaloid BBE medium borderline
Lsat01G0013690.1 Alkaloid BBE medium borderline