PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Mhamcontig_1100011280 Flavonoid 4CL medium pass
Mhamcontig_1160017940 Flavonoid 4CL medium pass
Mhamcontig_1280038520 Flavonoid 4CL medium pass
Mhamcontig_1420065230 Flavonoid 4CL low borderline
Mhamcontig_1660100580 Flavonoid 4CL medium pass
Mhamcontig_1720105000 Flavonoid 4CL low borderline
Mhamcontig_1890129090 Flavonoid 4CL medium pass
Mhamcontig_190130190 Flavonoid 4CL low borderline
Mhamcontig_2040147620 Flavonoid 4CL medium pass
Mhamcontig_2140156030 Flavonoid 4CL low borderline
Mhamcontig_240186820 Flavonoid 4CL low borderline
Mhamcontig_290204330 Flavonoid 4CL low borderline
Mhamcontig_410212650 Flavonoid 4CL low borderline
Mhamcontig_490219520 Flavonoid 4CL medium pass
Mhamcontig_650239380 Flavonoid 4CL medium pass
Mhamcontig_680244730 Flavonoid 4CL medium pass
Mhamcontig_680245060 Flavonoid 4CL low borderline
Mhamcontig_680251860 Flavonoid 4CL low borderline
Mhamcontig_740263800 Flavonoid 4CL medium pass
Mhamcontig_1310054600 Flavonoid ANR medium borderline
Mhamcontig_1940137450 Flavonoid ANR medium borderline
Mhamcontig_2220165710 Flavonoid ANR medium borderline
Mhamcontig_420214680 Flavonoid ANR medium borderline
Mhamcontig_420215310 Flavonoid ANR medium borderline
Mhamcontig_680245680 Flavonoid ANR low borderline
Mhamcontig_680248270 Flavonoid ANR medium borderline
Mhamcontig_680248560 Flavonoid ANR low borderline
Mhamcontig_870277130 Flavonoid ANR medium borderline
Mhamcontig_1820120910 Flavonoid ANS/LDOX medium borderline
Mhamcontig_1840122620 Flavonoid ANS/LDOX medium borderline
Mhamcontig_2020145760 Flavonoid ANS/LDOX medium borderline
Mhamcontig_2140156170 Flavonoid ANS/LDOX medium borderline
Mhamcontig_90279800 Flavonoid ANS/LDOX medium borderline
Mhamcontig_1220028570 Flavonoid C4H low borderline
Mhamcontig_1780113730 Flavonoid C4H low borderline
Mhamcontig_1910133090 Flavonoid C4H medium borderline
Mhamcontig_1910133100 Flavonoid C4H low borderline
Mhamcontig_1910133560 Flavonoid C4H medium borderline
Mhamcontig_1910133600 Flavonoid C4H medium borderline
Mhamcontig_1910133610 Flavonoid C4H medium borderline
Mhamcontig_1910133620 Flavonoid C4H medium borderline
Mhamcontig_1910133650 Flavonoid C4H medium borderline
Mhamcontig_1910133660 Flavonoid C4H medium borderline
Mhamcontig_1910133670 Flavonoid C4H medium borderline
Mhamcontig_1980139950 Flavonoid C4H medium borderline
Mhamcontig_2330174780 Flavonoid C4H medium borderline
Mhamcontig_680245410 Flavonoid C4H low borderline
Mhamcontig_1450069440 Flavonoid CHI medium pass
Mhamcontig_1290039490 Flavonoid CHS medium pass
Mhamcontig_1540077000 Flavonoid CHS medium pass