PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Mhamcontig_1940136540 Flavonoid F3H low borderline
Mhamcontig_1940136560 Flavonoid F3H low borderline
Mhamcontig_1990142230 Flavonoid F3H low borderline
Mhamcontig_2020145110 Flavonoid F3H medium borderline
Mhamcontig_2020145150 Flavonoid F3H medium borderline
Mhamcontig_2020145230 Flavonoid F3H medium borderline
Mhamcontig_2070150360 Flavonoid F3H medium borderline
Mhamcontig_2160157790 Flavonoid F3H medium borderline
Mhamcontig_2160157800 Flavonoid F3H medium borderline
Mhamcontig_2280170130 Flavonoid F3H medium borderline
Mhamcontig_2340182230 Flavonoid F3H medium borderline
Mhamcontig_260199980 Flavonoid F3H low borderline
Mhamcontig_290205290 Flavonoid F3H medium borderline
Mhamcontig_390208360 Flavonoid F3H medium borderline
Mhamcontig_590227140 Flavonoid F3H medium borderline
Mhamcontig_590227650 Flavonoid F3H medium borderline
Mhamcontig_590227710 Flavonoid F3H medium borderline
Mhamcontig_590229030 Flavonoid F3H medium borderline
Mhamcontig_610236730 Flavonoid F3H medium pass
Mhamcontig_680250550 Flavonoid F3H medium borderline
Mhamcontig_680250560 Flavonoid F3H medium borderline
Mhamcontig_750266840 Flavonoid F3H medium borderline
Mhamcontig_750266980 Flavonoid F3H medium borderline
Mhamcontig_750267050 Flavonoid F3H low borderline
Mhamcontig_750267060 Flavonoid F3H low borderline
Mhamcontig_750267180 Flavonoid F3H medium borderline
Mhamcontig_870277400 Flavonoid F3H medium borderline
Mhamcontig_90279900 Flavonoid F3H medium borderline
Mhamcontig_680250540 Flavonoid FLS medium borderline
Mhamcontig_1280038160 Flavonoid FNS medium borderline
Mhamcontig_1780113110 Flavonoid FNS medium borderline
Mhamcontig_1910133590 Flavonoid FNS medium borderline
Mhamcontig_2110152170 Flavonoid FNS medium borderline
Mhamcontig_1050007680 Flavonoid IFR low borderline
Mhamcontig_1160017260 Flavonoid IFR low borderline
Mhamcontig_120020640 Flavonoid IFR low borderline
Mhamcontig_1280032940 Flavonoid IFR low borderline
Mhamcontig_130041180 Flavonoid IFR medium pass
Mhamcontig_1310042670 Flavonoid IFR low borderline
Mhamcontig_1310043670 Flavonoid IFR low borderline
Mhamcontig_1310050600 Flavonoid IFR low borderline
Mhamcontig_1310052030 Flavonoid IFR low borderline
Mhamcontig_1400063910 Flavonoid IFR low borderline
Mhamcontig_1500073460 Flavonoid IFR high pass
Mhamcontig_1640093850 Flavonoid IFR low borderline
Mhamcontig_1660101970 Flavonoid IFR low borderline
Mhamcontig_1740110490 Flavonoid IFR low borderline
Mhamcontig_1810115800 Flavonoid IFR low borderline
Mhamcontig_1820118980 Flavonoid IFR low borderline
Mhamcontig_190130440 Flavonoid IFR low borderline