PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Mhamcontig_1150014880 Alkaloid NMT low borderline
Mhamcontig_1160016120 Alkaloid NMT low borderline
Mhamcontig_120021570 Alkaloid NMT low borderline
Mhamcontig_1220028050 Alkaloid NMT medium pass
Mhamcontig_1280035040 Alkaloid NMT medium pass
Mhamcontig_1310047790 Alkaloid NMT low borderline
Mhamcontig_1310050320 Alkaloid NMT low borderline
Mhamcontig_1550077620 Alkaloid NMT medium pass
Mhamcontig_1610091510 Alkaloid NMT low borderline
Mhamcontig_1640093930 Alkaloid NMT medium pass
Mhamcontig_1640094180 Alkaloid NMT low borderline
Mhamcontig_1640094560 Alkaloid NMT medium borderline
Mhamcontig_1660099910 Alkaloid NMT low borderline
Mhamcontig_1720105440 Alkaloid NMT medium borderline
Mhamcontig_1730107750 Alkaloid NMT medium pass
Mhamcontig_1730108100 Alkaloid NMT medium borderline
Mhamcontig_1820119840 Alkaloid NMT medium pass
Mhamcontig_1970138030 Alkaloid NMT medium pass
Mhamcontig_1970138250 Alkaloid NMT low borderline
Mhamcontig_2040148070 Alkaloid NMT medium pass
Mhamcontig_2070151150 Alkaloid NMT medium borderline
Mhamcontig_2110151720 Alkaloid NMT medium pass
Mhamcontig_2150157070 Alkaloid NMT medium pass
Mhamcontig_2160158460 Alkaloid NMT medium pass
Mhamcontig_2170159200 Alkaloid NMT low borderline
Mhamcontig_2260168080 Alkaloid NMT medium pass
Mhamcontig_240187240 Alkaloid NMT medium pass
Mhamcontig_240190630 Alkaloid NMT low borderline
Mhamcontig_260197400 Alkaloid NMT medium pass
Mhamcontig_260198660 Alkaloid NMT medium pass
Mhamcontig_260199400 Alkaloid NMT medium borderline
Mhamcontig_410212660 Alkaloid NMT low borderline
Mhamcontig_420215960 Alkaloid NMT low borderline
Mhamcontig_500220510 Alkaloid NMT low borderline
Mhamcontig_60229460 Alkaloid NMT medium borderline
Mhamcontig_60231760 Alkaloid NMT medium pass
Mhamcontig_60233300 Alkaloid NMT low borderline
Mhamcontig_680245030 Alkaloid NMT low borderline
Mhamcontig_680252730 Alkaloid NMT low borderline
Mhamcontig_680252870 Alkaloid NMT medium pass
Mhamcontig_740264020 Alkaloid NMT low borderline
Mhamcontig_750266390 Alkaloid NMT medium pass
Mhamcontig_910281490 Alkaloid NMT medium borderline
Mhamcontig_1030003790 Alkaloid PMT low borderline
Mhamcontig_1040005160 Alkaloid PMT low borderline
Mhamcontig_1200024100 Alkaloid PMT low borderline
Mhamcontig_1310042270 Alkaloid PMT medium pass
Mhamcontig_1310051350 Alkaloid PMT low borderline
Mhamcontig_1730107230 Alkaloid PMT low borderline
Mhamcontig_1990141850 Alkaloid PMT low borderline