PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Mhamcontig_670243470 Terpenoid CYP76 low borderline
Mhamcontig_670243600 Terpenoid CYP76 medium borderline
Mhamcontig_680247670 Terpenoid CYP76 low borderline
Mhamcontig_740263820 Terpenoid CYP76 medium borderline
Mhamcontig_750265420 Terpenoid CYP76 medium borderline
Mhamcontig_750265650 Terpenoid CYP76 medium borderline
Mhamcontig_870277630 Terpenoid CYP76 medium borderline
Mhamcontig_90278780 Terpenoid CYP76 medium borderline
Mhamcontig_2310173620 Terpenoid DXR high pass
Mhamcontig_1370061380 Terpenoid DXS medium pass
Mhamcontig_1570080600 Terpenoid DXS medium pass
Mhamcontig_1310050480 Terpenoid FPPS low borderline
Mhamcontig_1310050490 Terpenoid FPPS medium pass
Mhamcontig_1370059190 Terpenoid FPPS medium borderline
Mhamcontig_1850124210 Terpenoid FPPS medium pass
Mhamcontig_920282140 Terpenoid FPPS medium pass
Mhamcontig_1200023770 Terpenoid GGPPS low borderline
Mhamcontig_1200023780 Terpenoid GGPPS medium pass
Mhamcontig_120019380 Terpenoid GGPPS medium borderline
Mhamcontig_1310043900 Terpenoid GGPPS medium borderline
Mhamcontig_1600088450 Terpenoid GGPPS medium borderline
Mhamcontig_2180164190 Terpenoid GGPPS medium borderline
Mhamcontig_2250166960 Terpenoid GPPS medium pass
Mhamcontig_590227130 Terpenoid GPPS medium borderline
Mhamcontig_60232300 Terpenoid GPPS low borderline
Mhamcontig_1520075960 Terpenoid HDR/IspH high pass
Mhamcontig_1010001570 Terpenoid HDS/IspG high pass
Mhamcontig_1160016390 Terpenoid HMGR medium pass
Mhamcontig_1160016470 Terpenoid HMGR medium pass
Mhamcontig_2380186030 Terpenoid HMGR low borderline
Mhamcontig_1310051620 Terpenoid HMGS high pass
Mhamcontig_580226590 Terpenoid HMGS high pass
Mhamcontig_1820119300 Terpenoid IDI medium pass
Mhamcontig_60231140 Terpenoid IDI medium pass
Mhamcontig_1520075190 Terpenoid MCT/IspD low borderline
Mhamcontig_190129750 Terpenoid MCT/IspD low borderline
Mhamcontig_650239290 Terpenoid MCT/IspD high pass
Mhamcontig_1890128290 Terpenoid MDS/IspF high pass
Mhamcontig_1400064710 Terpenoid MVD low borderline
Mhamcontig_1420065920 Terpenoid MVD medium pass
Mhamcontig_1310045450 Terpenoid MVK low borderline
Mhamcontig_1640093890 Terpenoid MVK medium pass
Mhamcontig_500221910 Terpenoid MVK low borderline
Mhamcontig_540222830 Terpenoid PMK medium pass
Mhamcontig_1640095080 Terpenoid TPS medium pass
Mhamcontig_1660102990 Terpenoid TPS medium pass
Mhamcontig_1200022920 Terpenoid UGT low borderline
Mhamcontig_1200023290 Terpenoid UGT medium pass
Mhamcontig_1200023300 Terpenoid UGT medium pass
Mhamcontig_1200023340 Terpenoid UGT medium pass