Micromonas sp.RCC299 (micromonas_sp_rcc299)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 38.2% Alkaloid pathway 26.97% Phenylpropanoid pathway 14.61% Steroid pathway 14.61% Rosmarinic acid pathway 3.37% Flavonoid pathway 2.25%

Family Distribution

89 Candidate Genes

NMT 8.0% BAHD 6.15% 4CL 5.54% IFR 5.23% CYP71 5.23% C4H 3.38% POD 3.38% C3'H/CYP98A 3.38%

Other Families 59.69%

More Families (71)

TRI/TRII 10 3.08% IFS 10 3.08% H6H 8 2.46% STR 8 2.46% CNMT 8 2.46% SMT1/SMT2/SMT3 7 2.15% F3H 6 1.85% ANR 6 1.85% CSE 6 1.85% CYP76 6 1.85% PMT 5 1.54% T3O 5 1.54% COR 5 1.54% CAS 5 1.54% DWF4/CYP90B1 5 1.54% GS 4 1.23% SQS/FDFT1 4 1.23% G8O/G8H 3 0.92% CYP80B1 3 0.92% SLS 3 0.92% DFR 3 0.92% CCR 3 0.92% RAS 3 0.92% CPR 3 0.92% CYP90D1 3 0.92% CPD/CYP90A1 3 0.92% FPPS 3 0.92% GGPPS 3 0.92% AACT 3 0.92% MVK 3 0.92% PYKS 2 0.62% GES 2 0.62% UFGT 2 0.62% FNS 2 0.62% DET2 2 0.62% MCT/IspD 2 0.62% MPO 1 0.31% 8HGO 1 0.31% ODC 1 0.31% TDC 1 0.31% T16H 1 0.31% NCS 1 0.31% 7DLH 1 0.31% F3'5'H/CYP75A 1 0.31% CHS 1 0.31% ANS/LDOX 1 0.31% FLS 1 0.31% F3'H/CYP75B 1 0.31% COMT 1 0.31% F5H/CYP84A 1 0.31% CAD 1 0.31% CCoAOMT 1 0.31% TAT 1 0.31% HPPR 1 0.31% FK 1 0.31% DWF5 1 0.31% BR6OX2/CYP85A2 1 0.31% SQE 1 0.31% CYP51G1 1 0.31% CPI1 1 0.31% BR6OX1/CYP85A1 1 0.31% SMO1/SMO2 1 0.31% DXS 1 0.31% MVD 1 0.31% DXR 1 0.31% CMK/IspE 1 0.31% MDS/IspF 1 0.31% IDI 1 0.31% UGT 1 0.31% HDS/IspG 1 0.31% HDR/IspH 1 0.31%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	34	12	BAHD (13)	View species results
Alkaloid pathway	24	8	NMT (7)	View species results
Phenylpropanoid pathway	13	4	POD (10)	View species results
Steroid pathway	13	8	CAS (4)	View species results
Rosmarinic acid pathway	3	2	CPR (2)	View species results
Flavonoid pathway	2	1	IFR (2)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	20	88	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, SLS, T16H, T3O
BAHD/acyltransferase	2	23	BAHD, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Alkaloid pathway

Gene	Pathway	Family	Confidence	Status
61711\|PACid:27397664	Alkaloid	NMT	low	borderline
63548\|PACid:27402703	Alkaloid	NMT	low	borderline
64853\|PACid:27397264	Alkaloid	NMT	low	borderline
73010\|PACid:27400127	Alkaloid	NMT	medium	pass
77641\|PACid:27398750	Alkaloid	NMT	medium	pass
78558\|PACid:27396872	Alkaloid	NMT	medium	pass
81638\|PACid:27395415	Alkaloid	NMT	medium	borderline
82306\|PACid:27396002	Alkaloid	NMT	medium	borderline
83006\|PACid:27402071	Alkaloid	NMT	low	borderline
86035\|PACid:27397558	Alkaloid	NMT	medium	pass
89128\|PACid:27397056	Alkaloid	NMT	medium	pass
93596\|PACid:27396199	Alkaloid	NMT	medium	borderline
99875\|PACid:27400202	Alkaloid	NMT	low	borderline
58289\|PACid:27395279	Alkaloid	ODC	low	borderline
106331\|PACid:27399955	Alkaloid	PMT	medium	borderline
53854\|PACid:27397682	Alkaloid	PMT	low	borderline
59360\|PACid:27402267	Alkaloid	PMT	low	borderline
71683\|PACid:27401553	Alkaloid	PMT	low	borderline
80273\|PACid:27398492	Alkaloid	PMT	medium	pass
103294\|PACid:27399946	Alkaloid	PYKS	low	borderline
109209\|PACid:27405097	Alkaloid	PYKS	low	borderline
59502\|PACid:27402096	Alkaloid	SLS	medium	borderline
61059\|PACid:27401341	Alkaloid	SLS	low	borderline
82397\|PACid:27402073	Alkaloid	SLS	medium	borderline
103799\|PACid:27402834	Alkaloid	STR	low	borderline
60232\|PACid:27404107	Alkaloid	STR	low	borderline
62193\|PACid:27397557	Alkaloid	STR	low	borderline
67033\|PACid:27404562	Alkaloid	STR	low	borderline
83467\|PACid:27404549	Alkaloid	STR	medium	pass
85720\|PACid:27397765	Alkaloid	STR	low	borderline
87771\|PACid:27402692	Alkaloid	STR	low	borderline
98752\|PACid:27396169	Alkaloid	STR	low	borderline
63226\|PACid:27399794	Alkaloid	T16H	medium	borderline
60720\|PACid:27403589	Alkaloid	T3O	medium	pass
60838\|PACid:27403159	Alkaloid	T3O	medium	pass
93908\|PACid:27400515	Alkaloid	T3O	medium	pass
95887\|PACid:27403866	Alkaloid	T3O	medium	pass
96121\|PACid:27397054	Alkaloid	T3O	low	borderline
58496\|PACid:27395326	Alkaloid	TDC	low	borderline
112662\|PACid:27400508	Alkaloid	TRI/TRII	medium	pass
113389\|PACid:27399280	Alkaloid	TRI/TRII	medium	pass
56784\|PACid:27398483	Alkaloid	TRI/TRII	medium	pass
59627\|PACid:27402390	Alkaloid	TRI/TRII	low	borderline
59967\|PACid:27404405	Alkaloid	TRI/TRII	low	borderline
62771\|PACid:27405327	Alkaloid	TRI/TRII	low	borderline
70649\|PACid:27397732	Alkaloid	TRI/TRII	low	borderline
78726\|PACid:27396052	Alkaloid	TRI/TRII	medium	pass
85187\|PACid:27401216	Alkaloid	TRI/TRII	low	borderline
86762\|PACid:27405148	Alkaloid	TRI/TRII	low	borderline